Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01635 ATGTTTCTGAGTGAAGAGACACGAGATTTGGATAGTGGGGAGGGTATATTGTCCGCCACGGTTGCTGTTCCTCTTCGGCGTGTGCACCTGCCCCGCCTCAGTTTGCTTACAGTCGACATGTCTCACTTTGGGAGATCTGGCCCTCCAGACATCAGAGACACCTACTCCCTTCTCGTCCTCAACATCACTTTCCGTACCACCGCAGACGATCTCTATCCACTCTTTGACAAGTACGGCAAGGTCGTCGATGTTTTCATCCCCAGAGACCGAAGGACTGGCGAGTCTCGAGGTTTTGCGTTTGTTCGCTATAAGTACGCAGATGAGGCACAAAAGGCGGTGGAAAAGCTTGATGGAAGAGTCGTCGATGGCAGAGAAATTATGGTTCAATTTGCGAAGTATGGACCTAATGCTGAACGAATTCACAAGGGCAGAGTAGCGGAATCATCATCGAAGCCAAGAGGGAGATCAAGGAGCCGCAGCCCTCGTCCTAGATATAAAGATGAACATAGAGATAGAGACTACAGGAGGAGAAGTCGCAGTCGGAGTAGGGAGAGATATGATCGTGACAAATACCGTGAAAGGGAGAGGGATCATCATCGGCGAAGCAGGAGCCACAGTGCAAGTCCTGATCGTCGCAGAGATCGTGGGAGAGACAGATATGATGGAGAGCGTCGTACTAGGAGCAGATCTTATGATAATGCATCCCCGGCTCGGCGTGAATCCAGTCCTCCTAGGAGCCCATCTCCACAGAAGAGGACTTCTCAGGGTGGACAGCATGGTGAACAAAATAGCAATGGGCAATCGCCTGCTCAAAATGATGTTTCACCACGTGACCGACCTGTAGATTCTCGAAGCCCATCTCCGCACAGATCTGATGCTGATGAATGATGGAGCTGCATTTCATGTGGAGGAAATACTAATGACCTGATGAGTTTTATTGATGAAGACAGTAAATCAGGGCTGTTGTGATCTACAACTTGATTATCAACATTGTTG 996 0.493 MFLSEETRDLDSGEGILSATVAVPLRRVHLPRLSLLTVDMSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERIHKGRVAESSSKPRGRSRSRSPRPRYKDEHRDRDYRRRSRSRSRERYDRDKYRERERDHHRRSRSHSASPDRRRDRGRDRYDGERRTRSRSYDNASPARRESSPPRSPSPQKRTSQGGQHGEQNSNGQSPAQNDVSPRDRPVDSRSPSPHRSDADE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01635 295 MobiDBLite consensus disorder prediction 235 274 - -
Bach3g01635 295 MobiDBLite consensus disorder prediction 277 295 - -
Bach3g01635 295 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 53 279 - -
Bach3g01635 295 Gene3D - 40 143 IPR012677 -
Bach3g01635 295 SMART rrm1_1 56 129 IPR000504 GO:0003723
Bach3g01635 295 MobiDBLite consensus disorder prediction 161 234 - -
Bach3g01635 295 MobiDBLite consensus disorder prediction 139 154 - -
Bach3g01635 295 MobiDBLite consensus disorder prediction 139 295 - -
Bach3g01635 295 FunFam Serine/arginine-rich splicing factor SC35 43 142 - -
Bach3g01635 295 CDD RRM_SRSF2_SRSF8 57 129 - -
Bach3g01635 295 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 57 126 IPR000504 GO:0003723
Bach3g01635 295 SUPERFAMILY RNA-binding domain, RBD 44 140 IPR035979 GO:0003676
Bach3g01635 295 SMART rrm2_1 56 129 IPR003954 GO:0003676
Bach3g01635 295 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 133 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01635 Bach-Chr3 25151169 25154269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01635 53 131 Eukaryotic Initiation Factors Gene Family AT3G11400 37.975 7.12e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01635 K12891 - qsa:O6P43_019650 303.908