Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01624 ATGGCAGCTACAATGGATTTCTACAGTAGCGGAGTACTTCAATCAGATCCCTTCCGAGGTGAGCTTATGGAAGTTCTTGAACCTTTTATGAAAAGTCCTTCCAATACTCCCTCCCCCTCTCCCTCTCCCTCAGCAGCCTCATCCCCATCTTCAAATTCTTCTCTACCTTCTACTTCCTATTCTCCCTCTTTCTGCTCCAACTACTTCAACTCCTCTCCTTCTTACCCCATCCAGCCCACTTGCTATGCAGATGGTTGCTCCCCATCGATGACCCCTGTATTTTCCGACGGGTTATCGAACAACCAAAACTTTATTGGTTTCGGGCAACTAAGTTCTGTTCTTGGGCTCAATCACCTAACTCCATCTCAGATTAACCAGATCCAAGCTCAGATCCAGCTCCAGAACCAGCAGAACATGTCCTGGCAGCAGAATAGGACCCTTAGCTTCCTGAGTCCCAAACCTATCCCTATGAAGCACATCGGGACACCTTCAAAACCAACAAAACTCTATAGGGGGGTCAGACAAAGGCATTGGGGCAAATGGGTAGCTGAGATCAGACTCCCAAAGAACCGCACACGTCTCTGGCTCGGTACCTTCGACACCGCTGAAGAAGCCGCCCTGGCCTACGACAAGGCCGCTTACAAGCTCAGAGGTGACTCTGCTAGGCTCAACTTTCCGAACCTCCGACACCAAGGTTCCTGTGTTGGGGGCGAATTCGGCGAGTACAAGCCTCTACATTCCTCAGTTGATGCTAAGCTTCAAGCAATATGTGAAAGCTTGGCTGAAATGCAGAAACAGGGGAAGTCTGACAAGCCCGCGGGCGCAGGTAAGAGGTCTTCAACAGCGCGGTCAAAGTTGGGTTCGACGGTGGTTCAGTCAAAGACAGTGACGTGCTCCGAGGAGCAGTCAGTGACCGGAGAAGTTGATCTGAAAGGGTCGGAGAACTCTTACAAGGTGGAAGTTTCCTCGTCTCCGGTGATGACCGAGAGTGAGGGATCTGGTGGTTCTTCACCTTTGTCAGATCTTACTTTTGCGGATGCCAGTGAGTTCCAATGGGATGCTGCTTCGGATAATCTTAATCTTCTCAAGTTCCCCTCTTATGAGATTGATTGGTCATCTCTCTGA 1125 0.5004 MAATMDFYSSGVLQSDPFRGELMEVLEPFMKSPSNTPSPSPSPSAASSPSSNSSLPSTSYSPSFCSNYFNSSPSYPIQPTCYADGCSPSMTPVFSDGLSNNQNFIGFGQLSSVLGLNHLTPSQINQIQAQIQLQNQQNMSWQQNRTLSFLSPKPIPMKHIGTPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDSARLNFPNLRHQGSCVGGEFGEYKPLHSSVDAKLQAICESLAEMQKQGKSDKPAGAGKRSSTARSKLGSTVVQSKTVTCSEEQSVTGEVDLKGSENSYKVEVSSSPVMTESEGSGGSSPLSDLTFADASEFQWDAASDNLNLLKFPSYEIDWSSL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01624 374 CDD AP2 168 228 IPR001471 GO:0003700|GO:0006355
Bach3g01624 374 MobiDBLite consensus disorder prediction 27 53 - -
Bach3g01624 374 PRINTS Ethylene responsive element binding protein signature 170 181 IPR001471 GO:0003700|GO:0006355
Bach3g01624 374 PRINTS Ethylene responsive element binding protein signature 192 208 IPR001471 GO:0003700|GO:0006355
Bach3g01624 374 Gene3D AP2/ERF domain 169 227 IPR036955 GO:0003700|GO:0006355
Bach3g01624 374 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 374 - -
Bach3g01624 374 MobiDBLite consensus disorder prediction 264 288 - -
Bach3g01624 374 Coils Coil 124 144 - -
Bach3g01624 374 ProSiteProfiles AP2/ERF domain profile. 169 226 IPR001471 GO:0003700|GO:0006355
Bach3g01624 374 SMART rav1_2 169 232 IPR001471 GO:0003700|GO:0006355
Bach3g01624 374 FunFam Ethylene-responsive transcription factor 2 168 227 - -
Bach3g01624 374 SUPERFAMILY DNA-binding domain 169 227 IPR016177 GO:0003677
Bach3g01624 374 Pfam AP2 domain 170 218 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01624 Bach-Chr3 25067681 25068805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01624 1 374 AP2-EREBP Transcription Factor Family AT1G78080 49.357 5.74e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g01624 AP2 8.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01624 K09286 - qsa:O6P43_015285 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01624 3 25067681 25068805 Bach12g00776 12 5409394 5411167 BWGD