Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01609 ATGTCATCTTCGAGTTCGAATTCGAATTCTCCGTGCGCCGCGTGCAAGCTTCAGAGGCGGAAGTGCACTCAAGAGTGCGTATTCGCGCCTTATTTCCCTCCGGATAACCCTCAGAAATTTGCCTATGTCCATAAGGTTTTTGGAGCAAGCAACGTGGCAAAGCTTCTCAATGAACTGAACGCCAACCAGCGAGAGGACGCCGTCAAATCTCTGGCATACGAAGCAGAAGCCCGTCTCCGGGACCCAGTTTATGGCTGTGTGGGTCTCATCTCTATCCTCCAACACAAGCTGAAGCAGTTACAGGCTGAACTCACTAGCGCTCAAAAAGAGCTCTCTAACTATATTGGACCCCAGGCCATGCTTCCTATGGTACCTCCTCCGCAAACCCAGCCACTCCCCCGCATTATCCCATCTGCTTTTCCATACAACAACGCGCCCCCGCCCATGATGGGGATCCCCACGCACGGTACCCAGTTGATGATTCGTGACCCTCAGCAGATTTTGGAGGGTCAGCAGTTGGCTGCGGCTTTAGCGGCAAGAGAGCAAGAGATGACACAGCAGCAACAGCAAGAGCTTTTCAGGTTTAATTGTGGCGGGTACGAAGTGGCTTCTGCTTCTGCTGGTGGCTTCAACCAGATGTCCACTGCCGCTGCGTTGTCGCCTTCATTGGCTCTGGGTCCTCTGGAGAACGCTTTCCAAATTCAACATGACCAAGCCGCTGAACATCAACATCCTTTACATCATCAACTGCAGGCTCAGTTGATTCTCAATCCACAGCAGCCACAAGAGCAACAAACGCCACTACCCCACAAGTCTGAAAGCGAGGATGGTGGGAGTACCCGACCTTATCGTTGA 855 0.5251 MSSSSSNSNSPCAACKLQRRKCTQECVFAPYFPPDNPQKFAYVHKVFGASNVAKLLNELNANQREDAVKSLAYEAEARLRDPVYGCVGLISILQHKLKQLQAELTSAQKELSNYIGPQAMLPMVPPPQTQPLPRIIPSAFPYNNAPPPMMGIPTHGTQLMIRDPQQILEGQQLAAALAAREQEMTQQQQQELFRFNCGGYEVASASAGGFNQMSTAAALSPSLALGPLENAFQIQHDQAAEHQHPLHHQLQAQLILNPQQPQEQQTPLPHKSESEDGGSTRPYR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01609 284 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Bach3g01609 284 Coils Coil 90 110 - -
Bach3g01609 284 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 231 - -
Bach3g01609 284 MobiDBLite consensus disorder prediction 258 273 - -
Bach3g01609 284 MobiDBLite consensus disorder prediction 258 284 - -
Bach3g01609 284 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01609 Bach-Chr3 24954905 24955759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01609 6 226 AS2 family AT5G66870 54.286 1.45e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach3g01609 LOB 2.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01609 - - qsa:O6P43_033796 311.612