Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01588 ATGACCGGGGGTCGATGTCACCGGCGGAAGAAGATGATGGGCGGGGAAGGAGGTTGCGGTACCGAGGAGAGGCCTCGCCCAGTTTCGAGGGTTCCGGCCAAAATCCCGGTGACCCAGCCGGAAATTCCCGAGAGCTCGACTGGTCTTCAAATCGATTATTACTCACAGGCTAGGAAAGCACTCAGTGAGCGTTCGCCTTTTGATGTTGCTGAAGAGACTTCAACCTCGACTGTGCCCACTCTGCCTAATGGGTTGGCAAACTTCTTGAACCGGCACTCTGATAGTCGGAGACGCCATAAGAAGTCTCATTCTGGTGCAGATAGGAAATCTTCTAGAGCAGGCGAGAAGTCTCGTAGTTCCAACATTTGGATTGAGACAGAGGAGTACTTTAGGGGCTTGACATTACCCGATATTGACTCGTTGTTGGATGCAGCATCATCCTGTAGTTTAGCTACTCGGAAATGTTTTTACATTCCAGTATTAGGAAATGCTCCGAGGCTCAATATAGGTAGTACTAAAAATGAAGACGAGACTGATGAAAAGGTAGATAGTGTGGCTATGAAAAATGGGGACGGTTTGTTGGAAACTCGAAGTGTTGCACCCGGTGTTTTGACTCCGGGTGATAAGGATGGCGCTACTTCTCATTCTTCTAGTAGTTTAGAATGGCTTTTAGGTTGTAGGAATAAGGTCTTCTTAACTTCAGAGCGCCCTTCAAAGAAAAGGAAGCTTTTGGGTGGTGATGCTGGGCTGGAGAAAGTTCTAATTGCCAGTCCTTGTGACGGGGACTCAAATTTGTGCCATTACTGCAGTAGGGGAGACACCAGCAGAGAGTCCAATCGATTAATAGTCTGTGCTTCTTGTAAAGTTGCAGTTCACCAGATGTGCTATGGTGTGGAAGACAATGTGGACGGGTCTTGGTTATGCTCCTGGTGTGAGCGAAAGGATGACGTTGGTGAATCAGTGAATCCTTGTGTGCTTTGCCCCAAGAAGGGTGGTGCTTTAAAACCTGTCAATGGAAGTGGGGAAAATGTGGGGTCTGTAGAGTTCGTTCACCTATTTTGTTGTCTGTGGTTGCCTGAGGTTTATATAGAGGACTTGAAGAAAATGGAGCCTGTTATGAATGTGAGAGGAATCAAGGAAACTCGGAACAAATTAGTATGTCATGTATGCAAGGTGAAGTCTGGTGCTTCTGTACGGTGTAGCCATGGTTCCTGCAGGACTTCCTTTCATCCTATCTGTGGACGGGAAGCTAGGCACAGGATGGAGGTTTGGGCAAAATATGGTTATGATAATGTTGAATTGCGAGCTTTTTGCTCCAAGCACTCGGAATTACATGAAAAAAACCACATCTTGCCATCAGGAGGTTCTGTAGCTGTTGGCGTTGAATCCTCTGTTGCCAATGAGTTTTCAGTGGCATCGTCAGTGGACAGAACCCACAATTCAAAAACTGGTTGCAAGAATGGAGATAATTTTGGGACTCATATGGTTACTTCTGACAGCTTTCCTGACAAGTTGAGCCATAGTGAACCACTGGAGATAGGGTTGTCCGATGGTAGGTTAAATGCTAGTGACATGTTGGAATCTGGTGGTGTGCAGCAACGAAATAATACTGGGATGGTGGGGAGGACTAACGAGGATGTTAATGCATCTGACTCCCTCAGTTTTGCTCTTGTTTTAAAGAAGTTGATTGATCGAGGAAAAGTTGATGCAAAGGTTGTAGCTTTGGACATTGGCATTTCACCTGATACATTAGCTGCAAAACTCAATGTAATACTCAAAGATGCTTGCTTGGCTCCAGATCTGCGACGGAAAATAGTCAATTGGCTTAAAGCTCATGTCTATACTAGTGCATTTCAGAAAACATCCAGACTGAAATTAAAACCAGCCAATTCATCCAAGGATGAAAGTGGAGCTATCGATGATTCTGATAATTTATCAATATCAGATTCAGATCTGCTGGATCCCGTTGCTGTTAAGTCAGTACCACCAAGGAGAAGAACCATTGGCAACATTAGGATTTTGAAGGATAATAAAGTGGTAAGCTCATCTGAGCCAGTTCCTAGTGAGAATAGAAAGGCAACGGATACAGTCAGGATAAAGCAACTTGACCATGAAAATCCAGGACATTTTGATGAAGCATCTATTCCAGACGCAACTGAAATGAATTTAACCAAGTTGGAGGATACTTTTCTTGAAGGTCAAGGCATTGCAGATAAACCCTACAAAAGCAGCTTTTCTGGCTCTGTTCCTGAAGAGAACTTTGCTGTGTGTATGCAGGATGTTTCTGTGTTTAAAGATCAGCTTTATTCAGTTCATTCTGCTACGGAATCACCTGCTCCTGTTTTCATAAAGAAAGAAGCAACTTCTAGTTATATTCATCCATACATTGGCAAGAAATTGATGCAGATTCATAATTGGATACTGTCAAAGGACATTATATGTCCAGGGGAGGGAAATTCTGGTTTGAATGAATCCTCAGGGGCTAGTGGTTGCTTGGGTTACCAAAATCAGCAGTCAACTTGCAGTGACATTGGCAAGCCTAAGCAAGAATATATGGAGCATTTGGTAAAAACGGAAGTTCCTGAATCTTCTCCAGAAGATGAAATGGAGGGTGAACTCATATATTTTCAACATAGGCTATTGCAGAATTCAGTTGCTAGAAAGCAAATTGCTGGTAATTTAATCTGCAATGTAGCTAAGAGTTTGCCTCAGGAGATTGATGCAGCATATCAGCAAAGATGGGATGCTGTGCTTGCTAACCAGTATCTATGTGATCTTAGGGAGGCAAAGAAGCAAGGCAGGAAAGAGAGAAGGCATAAGGAAGCACAAGCTGTCCTAGCTGCTGCAACTGCTGCTGCTGCAGCTTCTTCCAGGGTGTCTTCATTCCGGAAAGATGCCTTCGATGAATCAGGACAACATGAGATTTTGTTAAGTGGGAGGACTGGTGTTTACTCTCAGCCAATGCCACGAGCCAAAGAGATGCTTCCAAGAGTAGCTGTGGCGAGGACTTCATCAGAAAAATATTCAGATTTTGGTCATCAATCCTCTGATATTTCTAAGGAGCGTTCTAGATCTTGTGATATCTGCAGGCGATCTGAGACTATATTAAATCCTATCCTTGTTTGCGCTGGTTGCAAGGTTGCAGTTCACTTGGATTGCTATCATAGTGTGAAAGAAACAACAGGTCCATGGTGTTGTGAATTATGTGAAGATTTATCATCTAGAGGCTCTGGCGCTCCTGCTGTCAATTTCTGGGAGAAGCCTTATTTTGTTGCAGAATGTGGTCTATGTGGTGGTACTACTGGTGCTTTCAGGAAGTCTTCTGACGGTCAATGGGTCCATGCCTTCTGTGCTGAGTGGGTTTTTGAGTCTACATTCCGAAGAGGACAAGTAAATGCTGTTCAAGGAATGGAGACTGTGTTGAAGGGGGTTAGTATATGTTGCATCTGCCACCGTAAACATGGTGTATGTATAAAGTGTAACTATGGCCACTGTCAGACAACATTCCATCCATCCTGTGCTAGAAGTTCTGGTTTTTACATGATTGCAAGGATTGCTGGTGGCAAGCTGCAGCACAAGGCCTACTGTGAAAAGCATGGCGCAGAGCAGAGGACAAAGGCTGAAACTCAAAAGCATGCAATGGAGGAGTTAAAAAGCATCAAGCAAACTAGGGTTGAGTTAGAGAGGTTGCGTCTCCTTTGCGAAAGAATAGTCAAACGTGAGAAAATAAAGCGGGAATTGGTTCTATGCTCACATGACATACTTGCCTTCAGAAGAGATCATGTTGCTAGGTCTGTGCTGGTTCATAGCCCCTTCTTCCTTCCTGATGGTAGCTCAGAATCAGCTACAACATCCCTGAAAGGGAATACGGAGGGATACAGATCATGCAGTGAAGCAGTCCAAAGATCGGATGATGTAACTGTGGACAGTTTGGTGTCTGGCAAGCCCGGAGTTAGAGTTGCTGTATCTATCGACGCCGACCCAAAATTGGATGATGACTGCTCAACCTCACAAAGCCATTATAACCATAAGATTCCGCAGAGGATGCAATTTTCTGGCAAGCAGATTTCTCATAGAGCTTCTGTCTCATCATGTAATCTTTTGGACGAAAGTGGATGGAGATCGAAATCAAGAAAGCATGCAGAGACACTTGAGAAAGAGCTTGTCATGACCTCAGATGAAGCATCTATGAAGAATTTAATGTTACCTAAAGGATATGCATATGTACCCGCTGACTGCCTGTCAAATGATAAGCAACATGATCAGGATGTATATGCTAGTGGACCATTGAAACATGATGGGTAG 4305 0.4404 MTGGRCHRRKKMMGGEGGCGTEERPRPVSRVPAKIPVTQPEIPESSTGLQIDYYSQARKALSERSPFDVAEETSTSTVPTLPNGLANFLNRHSDSRRRHKKSHSGADRKSSRAGEKSRSSNIWIETEEYFRGLTLPDIDSLLDAASSCSLATRKCFYIPVLGNAPRLNIGSTKNEDETDEKVDSVAMKNGDGLLETRSVAPGVLTPGDKDGATSHSSSSLEWLLGCRNKVFLTSERPSKKRKLLGGDAGLEKVLIASPCDGDSNLCHYCSRGDTSRESNRLIVCASCKVAVHQMCYGVEDNVDGSWLCSWCERKDDVGESVNPCVLCPKKGGALKPVNGSGENVGSVEFVHLFCCLWLPEVYIEDLKKMEPVMNVRGIKETRNKLVCHVCKVKSGASVRCSHGSCRTSFHPICGREARHRMEVWAKYGYDNVELRAFCSKHSELHEKNHILPSGGSVAVGVESSVANEFSVASSVDRTHNSKTGCKNGDNFGTHMVTSDSFPDKLSHSEPLEIGLSDGRLNASDMLESGGVQQRNNTGMVGRTNEDVNASDSLSFALVLKKLIDRGKVDAKVVALDIGISPDTLAAKLNVILKDACLAPDLRRKIVNWLKAHVYTSAFQKTSRLKLKPANSSKDESGAIDDSDNLSISDSDLLDPVAVKSVPPRRRTIGNIRILKDNKVVSSSEPVPSENRKATDTVRIKQLDHENPGHFDEASIPDATEMNLTKLEDTFLEGQGIADKPYKSSFSGSVPEENFAVCMQDVSVFKDQLYSVHSATESPAPVFIKKEATSSYIHPYIGKKLMQIHNWILSKDIICPGEGNSGLNESSGASGCLGYQNQQSTCSDIGKPKQEYMEHLVKTEVPESSPEDEMEGELIYFQHRLLQNSVARKQIAGNLICNVAKSLPQEIDAAYQQRWDAVLANQYLCDLREAKKQGRKERRHKEAQAVLAAATAAAAASSRVSSFRKDAFDESGQHEILLSGRTGVYSQPMPRAKEMLPRVAVARTSSEKYSDFGHQSSDISKERSRSCDICRRSETILNPILVCAGCKVAVHLDCYHSVKETTGPWCCELCEDLSSRGSGAPAVNFWEKPYFVAECGLCGGTTGAFRKSSDGQWVHAFCAEWVFESTFRRGQVNAVQGMETVLKGVSICCICHRKHGVCIKCNYGHCQTTFHPSCARSSGFYMIARIAGGKLQHKAYCEKHGAEQRTKAETQKHAMEELKSIKQTRVELERLRLLCERIVKREKIKRELVLCSHDILAFRRDHVARSVLVHSPFFLPDGSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSLVSGKPGVRVAVSIDADPKLDDDCSTSQSHYNHKIPQRMQFSGKQISHRASVSSCNLLDESGWRSKSRKHAETLEKELVMTSDEASMKNLMLPKGYAYVPADCLSNDKQHDQDVYASGPLKHDG 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01588 1434 PANTHER PHD FINGER PROTEINS 71 966 - -
Bach3g01588 1434 CDD ePHD 1094 1199 - -
Bach3g01588 1434 Pfam PHD-finger 1037 1070 - -
Bach3g01588 1434 Pfam PHD-finger 279 312 - -
Bach3g01588 1434 MobiDBLite consensus disorder prediction 1 49 - -
Bach3g01588 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 317 IPR013083 -
Bach3g01588 1434 SMART PHD_3 386 442 IPR001965 -
Bach3g01588 1434 SMART PHD_3 1025 1070 IPR001965 -
Bach3g01588 1434 SMART PHD_3 265 312 IPR001965 -
Bach3g01588 1434 SMART PHD_3 1146 1200 IPR001965 -
Bach3g01588 1434 Coils Coil 1210 1240 - -
Bach3g01588 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1001 1077 IPR013083 -
Bach3g01588 1434 ProSiteProfiles Zinc finger PHD-type profile. 1023 1072 IPR019787 -
Bach3g01588 1434 ProSiteProfiles Zinc finger PHD-type profile. 263 314 IPR019787 -
Bach3g01588 1434 ProSiteProfiles Extended PHD (ePHD) domain profile. 1091 1200 IPR034732 -
Bach3g01588 1434 SUPERFAMILY FYVE/PHD zinc finger 255 331 IPR011011 -
Bach3g01588 1434 ProSiteProfiles Extended PHD (ePHD) domain profile. 321 442 IPR034732 -
Bach3g01588 1434 ProSitePatterns Zinc finger PHD-type signature. 266 311 IPR019786 -
Bach3g01588 1434 ProSitePatterns Zinc finger PHD-type signature. 1026 1069 IPR019786 -
Bach3g01588 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1091 1202 IPR013083 -
Bach3g01588 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 318 444 IPR013083 -
Bach3g01588 1434 MobiDBLite consensus disorder prediction 68 90 - -
Bach3g01588 1434 MobiDBLite consensus disorder prediction 65 119 - -
Bach3g01588 1434 SUPERFAMILY FYVE/PHD zinc finger 1017 1070 IPR011011 -
Bach3g01588 1434 Pfam PHD-zinc-finger like domain 1093 1199 - -
Bach3g01588 1434 Pfam PHD-zinc-finger like domain 323 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01588 Bach-Chr3 24822208 24831214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01588 260 449 C2H2 Transcription Factor Family AT3G14740 30.570 6.15e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01588 - - tpra:123896915 1731.46