Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01576 ATGGAGGATTTACAGAGTTCTCTAAAGGATCGTAATTTATCAGTTTCCACGATCACAGAGAAAGGTCGTTGTCTTTTTACGACCAGAGATTTCTGCCCAGGAGATGTAATCATAAGCCAAGAGCCTTATGTATGTGTACCCAACAACTCGACAGTTGAAACAAGATGTGATGGATGTTTCAAAACAAGTAACCTTAAAACGTGCTCAGCTTGTCATGTTGTATGGTATTGCGGAAGCACCTGTCAGAAGTCAGAGTGGAAGTCCCATCGTCTTGAATGTGAAGCCCTCTCAAGGCTCGACAAGGATAAGAGAAACTTTGTCACACCTTCCATACGACTGATGTTGAAACTTTATATCCGAAGGAAGTTGCAAAATGATAAGGTGATCCCAAGGACTGCTACGGACAACTACAGCTTGGTGGAGGCACTAGTTGCTCATATGTCTGACATTGATGAGAAACAACTGGTGCTGTACGCACAGATGGCTAATCTTGTAAATTTGATACTACAGTGGCCTGAAATCAACATAAAAGAGATTGCAGAGAATTTTTCCAAGTTTGCATGCAATGCACATACCATATGTGATAGTGAATTGAGACCCTTGGGCACAGGATTGTACCCTGTAATTTCCATTATCAACCACAGCTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGATTGGCTGTAGTACGTGCTGTGCAACATATACCCAACGGTTCTGAGGTCCTGATAAGTTATATAGAGACCGCCGGAAGCACCATGACTCGGCAGAAGGTTCTGAAAGAGCAGTACCTATTCACTTGCACATGTCCTCGCTGTGTTAAAGTGGGACAGTACGATGATATCCGAGAAAGTGCAATCCTAGAAGGATACAGATGCAAGAATGAAAAATGTGATGGTTTCTTGCTTCCTGCAGCTGATGGCAAGGGATTTGAATGCCAAGAATGTGGACTAGTTAGAGACAAGGAAGAGATAAAGAAGATTGCAGCTGAGGTGAAATCACTATCAGAAGACAAAGCTCCTATACTTTCTTCAACTGGGAATCGTCAAGAAGCTGTTTCTATATATAAGATGATTGAGAAACTCCAAACAAAACTGTGCCATCCTTTCTCAATCAACTTGATGCAGACTCGAGACAAGATTCTGAAGTTACTGATGGAGCTGAAACATTGGAGAGAAGCTCTAGAATACTGTAAATTGACCATACCAGTCTATCAAAGAGTTTATCCAGCCATTCATCCTTTGCTTGGTTTGCAATATTATACATGCGGAAAACTTGAATGGTTTTTGGGGGAGACAGAGGAAGCTGTTAAATCACTGACAAAGGCAGTGGATGTACTACGTATTACCCATGGAACAAATACACCTTTCATGAAGGAACTTTTGATGAAGTCGGAGGAAGCGCGTGCTGAAGTTTCTTATAAATACAAACAGTCTTCTTATGATTTTGATGAGTAG 1461 0.4155 MEDLQSSLKDRNLSVSTITEKGRCLFTTRDFCPGDVIISQEPYVCVPNNSTVETRCDGCFKTSNLKTCSACHVVWYCGSTCQKSEWKSHRLECEALSRLDKDKRNFVTPSIRLMLKLYIRRKLQNDKVIPRTATDNYSLVEALVAHMSDIDEKQLVLYAQMANLVNLILQWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQHIPNGSEVLISYIETAGSTMTRQKVLKEQYLFTCTCPRCVKVGQYDDIRESAILEGYRCKNEKCDGFLLPAADGKGFECQECGLVRDKEEIKKIAAEVKSLSEDKAPILSSTGNRQEAVSIYKMIEKLQTKLCHPFSINLMQTRDKILKLLMELKHWREALEYCKLTIPVYQRVYPAIHPLLGLQYYTCGKLEWFLGETEEAVKSLTKAVDVLRITHGTNTPFMKELLMKSEEARAEVSYKYKQSSYDFDE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01576 486 SUPERFAMILY SET domain 11 247 IPR046341 -
Bach3g01576 486 Pfam MYND finger 56 93 IPR002893 -
Bach3g01576 486 ProSiteProfiles SET domain profile. 11 248 IPR001214 GO:0005515
Bach3g01576 486 Coils Coil 319 339 - -
Bach3g01576 486 Gene3D - 106 190 - -
Bach3g01576 486 SUPERFAMILY TPR-like 340 447 IPR011990 GO:0005515
Bach3g01576 486 Gene3D - 55 105 - -
Bach3g01576 486 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
Bach3g01576 486 SMART set_7 11 254 IPR001214 GO:0005515
Bach3g01576 486 Gene3D SET domain 24 274 IPR046341 -
Bach3g01576 486 Pfam SET domain 22 247 IPR001214 GO:0005515
Bach3g01576 486 Gene3D Tetratricopeptide repeat domain 402 482 IPR011990 GO:0005515
Bach3g01576 486 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 15 468 - -
Bach3g01576 486 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01576 Bach-Chr3 24725177 24730457 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bach3g01576 SET 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01576 K11426 - qsa:O6P43_015224 784.637