Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01575 ATGAGCAAACCCAGAACCCATAGAAAACCCACCAAGCATGTCAACCAAAACCAAAACCAGCAGCCCCAGAAAACAGAGAAACAACCCTCCTGGGCTGTCGTGAGAGGCCTATTGACTTGTAGAAATGTCCAGACCCAACAGCAGCAGCAGCAGAAGCCGGAAGGGAAGCAACCAAAGCAAAAACAAGTAGAGAGAAAGCTACGAGAAGAGCAAGTCCCAGAAGAAAGCAGCAAGAAATGCAAGAAAATGAAATGTTCAGGTTCTCTTTGTAATAACACCAAGGTCATGTCACGGCCTGAAACGGGATCCCCCGATATGCACAAGAAAAGGGTCTCACTGGGCGCTTCTAACAACAATGATGCTTCTAGCAGATCCATGAAAGTTCCTCTTAATGAACTCAATGGAGTGGCGTCTGCTTCTTCTTCTTCATTGTCAGCATCATCTAATTCTTCTTCGGTTAGTGGGTCTTTCAGAGGAATGCCGTTCAGGAGGCTCTCTGGGTGTTATGAGTGTCGAATGGTGGTTGATCCTGTTCTGGGTTTCACCAGAGACCCTTCTCTGAGGAGTAGCATTTGTGCTTGCCCTGACTGTGGTGAGATCTTCATGAAAGCTGAAAATTTGGAGCTTCATCAGGCTGTTAAACATGCAGTTTCTGAACTGGGCCCTGAAGATACAAGCAAGAACATAGTGGAAATTATATTCCATTCAAGCTGGCTCAAGAAACAATCTCCAGTCTGCAAAATAGATCGCATACTCAAGGTCCATAACACCCAGAGGACTATTAGCAAATTTGAAGAGTACAGAGACTCCATCAAAGCCAAAGCAACAAAGCTTTCTAAGAAACACCCACGTTGCATAGCAGATGGGAATGAGCTGCTGAGGTTCTACTGCACCAGCTTTGCATGCTCACTAGGCCTAAATGGATCCTCCAACCTGTGCAACTCAATACCACAGTGCAATCTCTGTAGCATAATCAAGAATGGCTTCAAGGTGGCTGGAGAATTCAACGGAGGAAATGCTGGGAAAGGGATATTGACAACTGCAACAAGCGGGAAAGCCCACGATAAAGCTGAGGTTTCAACAGATGACAATAACGACAGGAGAGCAATGCTGGTTTGCCGGGTGATAGTAGGCAGGGTGAAGAAGAATCAGGAAGCAAATATGGAGGAGTATGATTCAGTTGCAGGGGCTGTTGGGGCTTACTCAAATGTGGATGAGTTGTATGTCTTCAACCCAAGAGCAATATTGCCTTGTTTTGTTGTAATCTACAGGGGTTTTTGA 1281 0.4559 MSKPRTHRKPTKHVNQNQNQQPQKTEKQPSWAVVRGLLTCRNVQTQQQQQQKPEGKQPKQKQVERKLREEQVPEESSKKCKKMKCSGSLCNNTKVMSRPETGSPDMHKKRVSLGASNNNDASSRSMKVPLNELNGVASASSSSLSASSNSSSVSGSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICACPDCGEIFMKAENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQRTISKFEEYRDSIKAKATKLSKKHPRCIADGNELLRFYCTSFACSLGLNGSSNLCNSIPQCNLCSIIKNGFKVAGEFNGGNAGKGILTTATSGKAHDKAEVSTDDNNDRRAMLVCRVIVGRVKKNQEANMEEYDSVAGAVGAYSNVDELYVFNPRAILPCFVVIYRGF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01575 426 ProSitePatterns Zinc finger C2H2 type domain signature. 192 215 IPR013087 -
Bach3g01575 426 Gene3D - 216 424 - -
Bach3g01575 426 MobiDBLite consensus disorder prediction 1 31 - -
Bach3g01575 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 220 IPR013087 -
Bach3g01575 426 MobiDBLite consensus disorder prediction 57 78 - -
Bach3g01575 426 MobiDBLite consensus disorder prediction 43 78 - -
Bach3g01575 426 SUPERFAMILY ADP-ribosylation 217 425 - -
Bach3g01575 426 MobiDBLite consensus disorder prediction 13 28 - -
Bach3g01575 426 MobiDBLite consensus disorder prediction 91 125 - -
Bach3g01575 426 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 80 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01575 Bach-Chr3 24713231 24714771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01575 27 424 C2H2 Transcription Factor Family AT1G75710 44.755 3.83e-105 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach3g01575 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01575 - - qsa:O6P43_015222 682.945