Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01556 ATGGTTAAGAAGATCCACACAGAGGCATCAAAGCCAGTGCAATCATTGTGTTCATCTGGATCATCATCATCAGCAGCAGCAGCAGCATCAGAAGGTAAAAAGAAGAAGTACAAGGGGGTGAGAATGAGGAGCTGGGGTTCATGGGTATCAGAGATTAGAGCACCTAACCAGAAAACAAGAATATGGTTAGGCTCTTATTCAACAGCAGAGGCTGCAGCCAGAGCCTATGATGCTGCACTTCTATGCCTTAAAGGCTCAAAAGCCAATCTCAACTTCCCTTTAAGTACTTCCTCACACTATATTCCTCAAGATACTGTCATGTCCCCAAAATCAATTCAAAGAGTAGCTGCAGCTGCAGCCAACAGTTTTGTTGACAATGTCAGCAGCCCACCATCTCCTCCACCTCCCTTCACCTCATCATACTCAGTTTCCTCTCCATCAATGGCTTCTTCCCCATCTGATCAGATCGACGATGATGTCTCGTTAGTATCATCTTTTGGGGTAAATGAACCAACGGCTATGATGGAATCTTGGTTCAACTTTGATGGTCTACAATCGCCAAAATACATTGATCAAATGCTAAGTGGTCCTCTGTTTGATATTGATATTCATACACCTCACACCCACCTGTTCGATGACTTGTATGAAGAAGAAAGCGATATTCGTTTGTGGAGCTTCTGCTGA 684 0.4386 MVKKIHTEASKPVQSLCSSGSSSSAAAAASEGKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSKANLNFPLSTSSHYIPQDTVMSPKSIQRVAAAAANSFVDNVSSPPSPPPPFTSSYSVSSPSMASSPSDQIDDDVSLVSSFGVNEPTAMMESWFNFDGLQSPKYIDQMLSGPLFDIDIHTPHTHLFDDLYEEESDIRLWSFC 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01556 227 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Bach3g01556 227 MobiDBLite consensus disorder prediction 126 156 - -
Bach3g01556 227 CDD AP2 35 95 IPR001471 GO:0003700|GO:0006355
Bach3g01556 227 Gene3D AP2/ERF domain 35 95 IPR036955 GO:0003700|GO:0006355
Bach3g01556 227 FunFam ethylene-responsive transcription factor ERF014-like 35 95 - -
Bach3g01556 227 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 164 - -
Bach3g01556 227 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Bach3g01556 227 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Bach3g01556 227 MobiDBLite consensus disorder prediction 1 23 - -
Bach3g01556 227 SUPERFAMILY DNA-binding domain 36 95 IPR016177 GO:0003677
Bach3g01556 227 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Bach3g01556 227 MobiDBLite consensus disorder prediction 141 156 - -
Bach3g01556 227 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01556 Bach-Chr3 24605920 24606603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01556 37 226 AP2-EREBP Transcription Factor Family AT1G21910 50.980 5.78e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g01556 AP2 4.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01556 - - gmx:100813615 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01556 3 24605920 24606603 Bach3g01556 3 24605920 24606603 ECH