Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01517 ATGGCAAGCCTGCAGCAACAACAGCAAGCCAGTGATGCAGCCAGAGCTGCACTTGCTGTAGGTAGCAATCGCATCACAGCCGTCGCATTAACGCCGCCCAACGTTTCTCCACCGCCTGAGCATCATGACCACTCAGATCATGGGAAACCTGGGTGGAGAAAGTTTCTATCTTATGTAGGACCTGGTTTCCTCGTCTCCTTGGCTTACCTTGATCCTGGCAATCTGGAAACTGATCTCCAAGCTGGGGCTAACCACAGATACGAGCTACTGTGGGTGATACTTATTGGGCTGGTGTTTGCACTTATAATTCAGTCATTGGCTGCAAATCTTGGAGTAACTACAGGGAAACACCTTTCAGAATTGTGTAAAGCTGAGTATCCGTTGCTCATCAAATACTGCTTGTGGCTGTTAGCTGAGCTTGCTGTCATAGCCGCTGATATACCCGAAGTTATTGGAACGGCGTTTGCTCTGAACATACTGTTCCACATCCCAGTATGGGCAGGAGTTCTGTTGACTGGCTTGAGCACTCTCTTGCTTCTCGGTCTCCAGAGATTTGGGATCAGAAAACTGGAATTGCTTATATCAGTTCTAGTTTTCATAATGGCAGGATGTTTCTTTGGGGAAATGAGTTATGTAAGACCACCAGCTTCTGATGTGTTAAAGGGAATGTTTATCCCTAAACTCAATGGTCAAGGAGCCACAGGCGACGCAATTGCCCTTCTGGGTGCCCTTGTCATGCCCCACAACCTCTTCCTCCACTCTGCCCTTGTGCTCTCTAGAAAAGTACCCAGTTCCGTAAGAGGCATAAATGATGCATGCAGATATTTTCTGATAGAAAGTGGGTTCGCTCTGTTCATAGCATTTCTAATTAACGTTGCAGTTGTTTCTGTATCTGGCACTGTTTGCTCAGCCGACAACCTTTCTGAGGGAGATACAGATCATTGCAGCGATCTTACTCTTAATTCTGCTTCTTTCCTTCTCCAGAATGTATTGGGAAAGTCCAGCTCAACCATTTATGGCATAGCACTGTTAGCCTCAGGACAAAGCTCTGCCATTACTGGCACCTATGCAGGACAGTATGTCATGCAGGGTTTCCTGGACCTCAAGATGAAAACATGGGCTAGGAACCTGATGACAAGGACAATTGCCATAACACCTAGTCTTATTGTCTCTATTATCGGTGGATCTGCCGGTGCAGGCCGGCTTATTATCATCGCTTCGATGATACTTTCGTTTGAGCTTCCATTTGCTTTGATTCCACTCCTAAAGTTTAGCAGCAGCAGCACCAAAATGGGTCCTCACAAGAATTCCATCATTATTATTGTGATATCATGGATCCTAGGCTTGGGGATCATCGGCATTAATGTGTACTACCTCAGCACTGGCTTCGTGGGTTGGCTAATTCATAGTAATCTACCAAAGGTGGCAAATGTGTTTATTGGGATCGTTGTTTTCCCTCTAATGGGAATATATATTCTCTCGATTATCTATTTAACCTTCAGAAAAGACACTGTTAAGACTTTTATAGAGACCAAGAACGACCCAATCCGCATGGAAAAAGGTCTCACTGATCTTCATGGACAAGTAGAGTTGGGTGAAATTCCTTATAGAGAAGATTTGGCCAGCATCCCACTGCCCCAGTAG 1644 0.4544 MASLQQQQQASDAARAALAVGSNRITAVALTPPNVSPPPEHHDHSDHGKPGWRKFLSYVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLVFALIIQSLAANLGVTTGKHLSELCKAEYPLLIKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLLGLQRFGIRKLELLISVLVFIMAGCFFGEMSYVRPPASDVLKGMFIPKLNGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGFALFIAFLINVAVVSVSGTVCSADNLSEGDTDHCSDLTLNSASFLLQNVLGKSSSTIYGIALLASGQSSAITGTYAGQYVMQGFLDLKMKTWARNLMTRTIAITPSLIVSIIGGSAGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILGLGIIGINVYYLSTGFVGWLIHSNLPKVANVFIGIVVFPLMGIYILSIIYLTFRKDTVKTFIETKNDPIRMEKGLTDLHGQVELGEIPYREDLASIPLPQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01517 547 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 38 505 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 NCBIfam Nramp family divalent metal transporter 60 426 - -
Bach3g01517 547 MobiDBLite consensus disorder prediction 29 48 - -
Bach3g01517 547 Hamap Divalent metal cation transporter MntH [mntH]. 40 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 PRINTS Natural resistance-associated macrophage protein signature 134 160 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 PRINTS Natural resistance-associated macrophage protein signature 237 260 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 PRINTS Natural resistance-associated macrophage protein signature 187 208 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 PRINTS Natural resistance-associated macrophage protein signature 162 181 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 PRINTS Natural resistance-associated macrophage protein signature 407 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 PRINTS Natural resistance-associated macrophage protein signature 375 392 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 PRINTS Natural resistance-associated macrophage protein signature 347 366 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 53 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach3g01517 547 Pfam Natural resistance-associated macrophage protein 76 437 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01517 Bach-Chr3 24334948 24338081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01517 16 547 Inorganic Solute Cotransporters AT1G15960 59.665 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01517 K21398 - gmx:100787785 848.966