Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01515 GTGAGGGGACATTGCAGTTGCAGGGGGGAAAAAAAGAAATAGATGGCGCCACTACTGCAGAGCTCTCAGCCATGGGTCGAGAAATATCGGCCAAAGCAAGTGAAAGACGTAGCTCACCAAGATGAAGTCGTTCGAGTACTCACCAACACCCTCGAAACCGGAAGTTGCCCGCACATGCTCTTCTATGGTCCTCCCGGAACCGGAAAAACCACAACCGCACTCGCAATTGCTCATCAGCTATACGGGCCTGAGCTCTACAAGTCTAGGGTGCTGGAGCTAAATGCAAGTGATGACCGTGGAATCAATGTTGTTCGCACAAAGATCAAAGGTTTTGCTGCTGTGGCTGTTGGTTCTGGTCAGCGTCATGGTGGTTATCCATGTCCACCATATAAGATTATTGTTCTAGATGAGGCAGATTCCATGACTGAAGATGCTCAGGCATGTTTACTATATTTGTCAAATGCTTTGAGGCGCACAATGGAAACTTACTCCAAAGTTACCAGATTCTTTTTTATATGCAATTACATTAGCAGGATTATAGAGCCACTTGCTTCAAGGTGTGCGAAATTCAGGTTCAAGCCACTGTCAGAAGAAATAATGAGCAACCGAATATTGTACATTTGTAAAGAAGAAGGGCTGCATCTTGATTCTGAGGCAACTTCTACGCTAAGTTCTATCTCTCAAGGAGATCTTCGTCGGGCCATCACATACTTGCAGTCAGCAGCCCGGTTATTTGGATCATCCATTTCTTCAAAGGACTTGATTTCTGTGTCTGGGGTCATTCCAGCTGAGGTTGTGCCGGCATTTCTTGTGGCATGCAAAAGTGGTAATTTTGATTTAGCGAACAAGGAAGTCAATAACTTTATTGCAGAGGGATATCCAGTATCTCAGATGTTATCTCAGCTATTTGAGGCCGTTGTTGAAGAGGATGATGTATCAGATGAACAGAAGGCAAGAATATCTAAGAAATTGGGTGAAGCAGATAAGTGCCTAGTTGATGGCGCTGATGAATACTTGCAGCTTCTTGATGTGGCCAGCAATACAATGAGAGCTCTTTGTAACATGCCTGAAGAAATTTCATGAGGGTTAGACATGACTGTAGCATTATCTCGTTAAATCCTGTAAGAGTCAGTTATTCAGCTGCAAAATTTATTTGCCAGTGAAATTATGTGAGTAAAACCGGAGTTGGGCCCCGATGTTGACTCGTGTAAATGTAAAATTTGAACAATTTGGAGCGGTATGCATTTTCGAATTGACTGGGCCAGTAAGGCAACTCTTGTCCTGAATGGTAGCAATGAGATATTGTATTCAAAAT 1315 0.4342 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKGFAAVAVGSGQRHGGYPCPPYKIIVLDEADSMTEDAQACLLYLSNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSNRILYICKEEGLHLDSEATSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPAEVVPAFLVACKSGNFDLANKEVNNFIAEGYPVSQMLSQLFEAVVEEDDVSDEQKARISKKLGEADKCLVDGADEYLQLLDVASNTMRALCNMPEEIS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01515 346 FunFam Replication factor C subunit 4 183 246 - -
Bach3g01515 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 240 IPR027417 -
Bach3g01515 346 SUPERFAMILY post-AAA+ oligomerization domain-like 248 332 IPR008921 GO:0003677|GO:0006260
Bach3g01515 346 Pfam Replication factor C C-terminal domain 250 331 IPR013748 -
Bach3g01515 346 SMART AAA_5 41 181 IPR003593 GO:0016887
Bach3g01515 346 FunFam Replication factor C subunit 5 3 181 - -
Bach3g01515 346 Pfam ATPase family associated with various cellular activities (AAA) 45 179 IPR003959 GO:0005524|GO:0016887
Bach3g01515 346 FunFam Replication factor C subunit 4 247 336 - -
Bach3g01515 346 CDD HLD_clamp_RFC 181 240 - -
Bach3g01515 346 Gene3D - 3 180 IPR027417 -
Bach3g01515 346 CDD AAA 26 173 - -
Bach3g01515 346 Gene3D - 183 246 - -
Bach3g01515 346 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 9 328 - -
Bach3g01515 346 Gene3D - 247 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01515 Bach-Chr3 24325510 24329703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01515 1 344 Core DNA Replication Machinery Family AT1G21690 77.391 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01515 K10755 - qsu:112038286 607.06