Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01498 CGCGATTTAGATTTCTGCGAATTTTGATTCAGTGCTCTTCAACCACTTCTCATTAGCAAGCGAATCCCGAGAAATTTTGGATCTTGGAAGATTGAGTTCACTGCGAAACCCTAATTTCTTCCTTTAAATCTTAGAAATTAGGGGTTCTTTTGTGCTGGAAGGATGGATACTGAAGATGGAGTCAACAATGCTAATAACACAGAATGTGCTGAAGGGGTTCAGTGCTTGAAAACTGAATCTACAGTTGATGGAGCCGCAATTGCAGATGAAAATGCTGTTGCTGAAGGCGTTCAGTGCTTGAAAATTGAATCTATAAGTAATGGGGTGGTAGTCGCACGGGAGAATGATGTTGCTGATAGGATGCAAAGTGAAGGTGTAATTAATGGGGTGGCAATTTCATATGGGAATTTTGTTGGTGAAGGGAGTTCTGGTAGAATTCAGACTTACAAGAGACGTAAGCAAGTAAATTCGAGTATAGAGAGCAAAGTTCAAGAAGATTGCAGAGCATATGTTGAAGCTGCAAATCATCTAGCGGAACAGGCTGTGAAGGAACCATGTAATCTCAATTTAGGCAGTACTTCTTACGGGCAATTCTGTCCACCTGTCAATGGCTCATATGAATATTCACATGGACACTGGGGAAATGTCGTACTAAGGCATCTGTATCAGTCATTAGGTGATGACAAGGGTGGCATTGAGGGGTCCATAAGGAAAGCACTGTTATATCAACCTAAAGCTAGTTGTGCCACTGCAGTTAAGGAAACTCATAAAATTGGCAAGGACAGGCAAGAATGCTCTTCGCAATTATCTCACAGAATACAAACTGAAGCTAATGGGAGGAGTATGGATGTTATACTTGATAGACATTTTACTGAATCAGATCTCCGTGGTGTGACTGACATCTGTCAACATGTACTCTTTTATATGTTTGCCTCAGAAAAATTCAATTTGTTATGTAAGGTGCTAAATGAAAGCTTCAAGGGGATGAAGCCTGAAGGTGCATTTGACTTTAGTGTCATAAACTCAAGGATGAAAGAGGGAGCTTACGAACAATCACCCACACTTTTCTTGTCAGACATTCAACAGGTGTGGAAAAAGCTTCATGATACTGGTAACGAAATTGTTTCTCTTGCCAAGGGCCTTTCGGATATGTCAAGAAATTATTACTATGAACAGGCAGGAGTTTCAGCACACAGCACATTTGAAGATGAAAAGCTAGAGTTCCGTAACCGGGAATCTGACTCTCACATGAAACCGGAGCAGACAGAAGTGCGTAGTATATACAAACTTTGCATTTGCAGGCATTGTGGAGACAAGGCAGGTGGAACAGACTGTTTAGTTTGTGATTCATGTGAGGGGATGTATCACATCTCCTGTATAGAGCCTGCTATGAAAGAGATTCCCCACAAAAATTGGTACTGTGCTGATTGCACTGCTAGTGGAATTGGATCTCCACATCAGAATTGCAAGGTGTGTGAAAGGTTGAATGTCCCAAAGACCCTGAACAACAAAGTTGGTCATGAAAACTTCCTCACAAATGAGGTGCTTCAGGAATTGGAAGACAATTCAAATTGTACTTATGATGGGCTTCAAGGATCCACAGCTGGGAAAGATTTGACTGTTTGCAGCGTCTGTGGAACTGATGTGGATGGGGAAAATATGAAAATCTGTGGGCACCCCTACTGCCTCAGTAAACACCACCATGTAAGGTGTTTGACTAGTAAGCAGTTAAACTCGTATGGTCCACGTTGGTATTGCCCTTCTTGTCTATGCCAAGTTTGTCTCACTGACCGGGACGATGATAAGATTGTTCTCTGTGATGGCTGTGATCATGCATACCACATATATTGCATGAAACCTCCACGAACTTCTATTCCAGAAGGGAAATGGTTCTGTAGAAAATGTGATGCTGGGATCCAAGCTATACGCCGGGCCAAAAAAGCATACGAGAGCAACAAACAGCGCAAAATAGGTAAAGGCAACATAAGGCCATGTGGAAATCTTGGAAAGAAATGGAAGAATAAACATAGAAGGGAATTAGACAAAGGTGGAGGAATGGAGATGCTTTTAACTGCAGCCAATACTCTGACTAATGAAGAGAACTTGGCAGCAATCCACATCGGTTCATAGTGAACATGACATTTTCTTGAGGACTAATTTTGAGCCTCCTAGTTATTCTTAGTAATGGCTTTAACTTCATACTTCTTAATACCCAATGATTTC 2223 0.4148 MDTEDGVNNANNTECAEGVQCLKTESTVDGAAIADENAVAEGVQCLKIESISNGVVVARENDVADRMQSEGVINGVAISYGNFVGEGSSGRIQTYKRRKQVNSSIESKVQEDCRAYVEAANHLAEQAVKEPCNLNLGSTSYGQFCPPVNGSYEYSHGHWGNVVLRHLYQSLGDDKGGIEGSIRKALLYQPKASCATAVKETHKIGKDRQECSSQLSHRIQTEANGRSMDVILDRHFTESDLRGVTDICQHVLFYMFASEKFNLLCKVLNESFKGMKPEGAFDFSVINSRMKEGAYEQSPTLFLSDIQQVWKKLHDTGNEIVSLAKGLSDMSRNYYYEQAGVSAHSTFEDEKLEFRNRESDSHMKPEQTEVRSIYKLCICRHCGDKAGGTDCLVCDSCEGMYHISCIEPAMKEIPHKNWYCADCTASGIGSPHQNCKVCERLNVPKTLNNKVGHENFLTNEVLQELEDNSNCTYDGLQGSTAGKDLTVCSVCGTDVDGENMKICGHPYCLSKHHHVRCLTSKQLNSYGPRWYCPSCLCQVCLTDRDDDKIVLCDGCDHAYHIYCMKPPRTSIPEGKWFCRKCDAGIQAIRRAKKAYESNKQRKIGKGNIRPCGNLGKKWKNKHRRELDKGGGMEMLLTAANTLTNEENLAAIHIGS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01498 655 SUPERFAMILY FYVE/PHD zinc finger 536 588 IPR011011 -
Bach3g01498 655 PANTHER OS02G0192300 PROTEIN 281 425 - -
Bach3g01498 655 SUPERFAMILY FYVE/PHD zinc finger 358 424 IPR011011 -
Bach3g01498 655 SUPERFAMILY FYVE/PHD zinc finger 483 536 IPR011011 -
Bach3g01498 655 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 509 587 IPR013083 -
Bach3g01498 655 Pfam PHD-finger 378 425 IPR019787 -
Bach3g01498 655 Pfam PHD-finger 537 582 IPR019787 -
Bach3g01498 655 SMART PHD_3 487 536 IPR001965 -
Bach3g01498 655 SMART PHD_3 539 582 IPR001965 -
Bach3g01498 655 SMART PHD_3 378 424 IPR001965 -
Bach3g01498 655 ProSitePatterns Zinc finger PHD-type signature. 377 423 IPR019786 -
Bach3g01498 655 ProSiteProfiles Zinc finger PHD-type profile. 534 584 IPR019787 -
Bach3g01498 655 FunFam PHD finger protein EHD3 isoform A 266 427 - -
Bach3g01498 655 Gene3D - 291 426 - -
Bach3g01498 655 ProSiteProfiles Zinc finger PHD-type profile. 374 426 IPR019787 -
Bach3g01498 655 ProSitePatterns Zinc finger PHD-type signature. 532 581 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01498 Bach-Chr3 24184895 24189599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01498 536 606 C2H2 Transcription Factor Family AT3G01460 46.479 1.35e-14 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach3g01498 PHD 1.8e-13 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01498 - - cam:101505792 737.643