Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01492 ATGTTGCTCCCACGGCAAATGTTGCTCCTGCTATTACTGGTATTATTGTTGATGGCCATTGCTTTAACAACAAAAGTAGCATCAGAATCACAAGTACAAGAAGCCAAACCAAATTGCACACAATATTGTGGCTCTGTTCTTATCCCTTACCCATTTGGCACAACAGCGGATTGTTCCCTTGATGACTCCTTTCTCATCACTTGCGATCAAAGTTCCAGCACTCCCACCCCCATGTTGCAAGCAGACAAATTGGCTGTCTCCGATATATCACCAGATGGTGAACTGCGGATTGCAAACAAGATATCCCAAGATTGTTACGACGAGCAAGGCAATCCCAACAGCACCTTTTCCTTGCTCAACTTGTCACACTTCTCCATCTCCCCCGGCCGCAACAAATTTGTTGCACTTGGTTGTGACACATACGCTGCCATGTATGGCTGGGATTCATCACGAGCAAATTATACCTATTACACAGGAATCTCTTCCTTTTGCATCTCACTTGATCAAGTCACCAATGAATCTTGCAATGGCTTGGGCTGCAACCAGAATATTATACCAAAAGGAGGATTACGCGGTTTCGCTCTCAATGCTGGTAGCATGAAAAACCATACTGACGTACGAAGCTTCAATCCTTGTGGTTACGCATTTGTCACTGAAGATAAAGCATACAACTTCTCCTCTACAGATCTTTTGGATATCAAGAAGCAGACAGCTACTATTGTGCTGGATTGGGCAGTGGGGAATCAAACATGCCAAGAAGCCAAAGGGTACGCTTGTAAGGCAGAGCACAGTCAATGTTTCGATGCAGAAGACGTAATTGGGTATCGCTGCAGGTGTTCCTCTGGTTTTCAGGGCAACCCTTACCTCCTTGATGGCTGTCATGACATTGATGAATGCAAGGATAATAACAACCCCTGCCCTGGAAAGTGCCGAAACAATCTTGGGAGCTATACCTGTAAACCAAAAGTAAATGTAACTCTCATACTCATAATAGCGTTCGGCGTAACCATATGCCTCTTGATACTACTTGTGGGAAGCATTAATGTACTCTTGGAATTGAAGAGAAGAAAGCTCATCGCACTAAGAAAACAAGCTTTCCGAAGAAATGGTGGTATATTGCTAGAAGAACAAATTGCCAAAGACAAAGATTTAGTTGAAACAGCCAAAATATTTACTGAAAAAGAGCTTAGAAAAGCCACCAACAATTTTGATGAGAGCATGGTGCTAGGTCAAGGGGGCACGGGAACAGTTTACAGAGGAGTATTATCAGATAATACAGTGGTTGCTATTAAGAAATCCAAAATTATTGACCAGAAGCCGGTTGAGCAATTCATCAATGAAGTGATTGTGCTTTCCCAAATCAACCACCGGAATGTGGTGAAGCTTTTGGGTTGTTGTTTGGAAACCGACGTTCCCTTGCTTGTTTATGAATTTGTTACAAATGGGACTCTTTCTGAGCACCTTCACAACGAAAGTCAATCATGTCAACTTTCATGGACTACTCGTTTGAGAGTGGCGACAGAAACTGCAGCAGCTTTGGCATACCTGCACTCTGCAACTTCTACACCAATCATACATAGAGATGATTCAGTAGCGTTGGTTATGGAGGATAAGAGAGAAGGTCTGCATCTAGTGGATGGCTTTGAGATGGGATTGTTGAAGAACAAGTCCCTTGTTGGAGAAAATGAATAG 1692 0.4303 MLLPRQMLLLLLLVLLLMAIALTTKVASESQVQEAKPNCTQYCGSVLIPYPFGTTADCSLDDSFLITCDQSSSTPTPMLQADKLAVSDISPDGELRIANKISQDCYDEQGNPNSTFSLLNLSHFSISPGRNKFVALGCDTYAAMYGWDSSRANYTYYTGISSFCISLDQVTNESCNGLGCNQNIIPKGGLRGFALNAGSMKNHTDVRSFNPCGYAFVTEDKAYNFSSTDLLDIKKQTATIVLDWAVGNQTCQEAKGYACKAEHSQCFDAEDVIGYRCRCSSGFQGNPYLLDGCHDIDECKDNNNPCPGKCRNNLGSYTCKPKVNVTLILIIAFGVTICLLILLVGSINVLLELKRRKLIALRKQAFRRNGGILLEEQIAKDKDLVETAKIFTEKELRKATNNFDESMVLGQGGTGTVYRGVLSDNTVVAIKKSKIIDQKPVEQFINEVIVLSQINHRNVVKLLGCCLETDVPLLVYEFVTNGTLSEHLHNESQSCQLSWTTRLRVATETAAALAYLHSATSTPIIHRDDSVALVMEDKREGLHLVDGFEMGLLKNKSLVGENE 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01492 563 ProSitePatterns Calcium-binding EGF-like domain signature. 295 319 IPR018097 GO:0005509
Bach3g01492 563 Pfam Wall-associated kinase 172 280 IPR013695 GO:0004674|GO:0016020
Bach3g01492 563 ProSitePatterns Protein kinases ATP-binding region signature. 409 432 IPR017441 GO:0005524
Bach3g01492 563 SUPERFAMILY Protein kinase-like (PK-like) 387 528 IPR011009 -
Bach3g01492 563 Gene3D Laminin 248 328 - -
Bach3g01492 563 SUPERFAMILY EGF/Laminin 293 320 - -
Bach3g01492 563 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 528 IPR045274 GO:0007166
Bach3g01492 563 CDD EGF_CA 295 319 - -
Bach3g01492 563 Pfam Wall-associated receptor kinase galacturonan-binding 39 97 IPR025287 GO:0030247
Bach3g01492 563 FunFam Wall-associated receptor kinase 2 373 478 - -
Bach3g01492 563 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Bach3g01492 563 ProSiteProfiles Protein kinase domain profile. 403 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g01492 563 SMART egfca_6 295 339 IPR001881 GO:0005509
Bach3g01492 563 Pfam Protein tyrosine and serine/threonine kinase 408 528 IPR001245 GO:0004672|GO:0006468
Bach3g01492 563 Gene3D Transferase(Phosphotransferase) domain 1 479 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01492 Bach-Chr3 24137276 24140813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01492 11 537 Receptor kinase-like Gene Family AT1G21250 40.794 1.19e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bach3g01492 PK_Tyr_Ser-Thr 6.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01492 - - cave:132184250 546.199