Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01482 ATGGAGGATTCGGCCTCTGGCTCAGCTGAAGACACCAAGACTTGTCCCCGTGGTCACTGGCGGCCGGCCGAGGATGAAAAGCTCCGGCAGCTCGTTGAGCAATATGGAGCCCAGAATTGGAATTCAATCGCTGAGAAGCTTCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTTAATCAACTTGATCCGAGAATTAACAGAAGGCCATTTACAGAAGAGGAAGAGGAGAGGTTATTGGCAGCTCACCGAATTCAAGGAAACAAGTGGGCACTGATAGCCAGGCTATTCCCTGGTCGAACTGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCACGAAAGCAAAGAGAACAATCTAAATTATGTGGCAAAAGAAGCTTCCAAGATGTTTATAATGATTTTAACTTTCCCACCTCAAACGAGAAAAGAGCAAAATTTCAGGATGTTTTTAGCTCAAAAAATGGGTTAGAGAATGCGAGATTCTTTGACTTCCGGAGCATCAATAAAGATAGGATAATCACAGCAGATAATTCCACCTCCAGTTCTTGGAATTTTGCATCCATGCCAACCTCCTATACCTATTCTAGAAAAGAAGGGAGAGACTATTTCGATTCCTACTCTAACATGTATCTCTCTGAATGCTCAAAATTTCCAGATAAATTTCTCTACAGAATTTACCCAAATTCTTCATCCTCCACCAGCTTTGGGGGTTCTACCAATACATTGGCGATTCCCAATTACAGGAGGGTTGTTCCAAGTTGTCCTTTTGGATTCCTTAGCACTGCTGATGAAGGAAGAATAAAGAAGAAGTGCATGAGTTTGTGTGAGAACTCATCCACATTCACAAAGTTGAGACCTTCTAAGGAGCAAGAGCAAGCAGATGAGCCTAATATTGAACACAAAGAGGTTCCTTTCATTGATTTTCTTGGAGTGGGTGTCTCTTCATCATAA 960 0.4219 MEDSASGSAEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIQGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVYNDFNFPTSNEKRAKFQDVFSSKNGLENARFFDFRSINKDRIITADNSTSSSWNFASMPTSYTYSRKEGRDYFDSYSNMYLSECSKFPDKFLYRIYPNSSSSTSFGGSTNTLAIPNYRRVVPSCPFGFLSTADEGRIKKKCMSLCENSSTFTKLRPSKEQEQADEPNIEHKEVPFIDFLGVGVSSS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01482 319 SUPERFAMILY Homeodomain-like 16 110 IPR009057 -
Bach3g01482 319 Gene3D - 17 68 - -
Bach3g01482 319 SMART sant 68 116 IPR001005 -
Bach3g01482 319 SMART sant 16 65 IPR001005 -
Bach3g01482 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 63 IPR017930 -
Bach3g01482 319 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bach3g01482 319 CDD SANT 71 111 IPR001005 -
Bach3g01482 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bach3g01482 319 FunFam MYB transcription factor 17 68 - -
Bach3g01482 319 CDD SANT 20 61 IPR001005 -
Bach3g01482 319 FunFam MYB transcription factor 70 138 - -
Bach3g01482 319 PANTHER MYB PROTEIN-RELATED 17 201 - -
Bach3g01482 319 MobiDBLite consensus disorder prediction 1 23 - -
Bach3g01482 319 Gene3D - 71 131 - -
Bach3g01482 319 Pfam Myb-like DNA-binding domain 20 80 - -
Bach3g01482 319 ProSiteProfiles Myb-like domain profile. 17 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01482 Bach-Chr3 24062509 24063765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01482 15 124 MYB Transcription Factor Family AT1G17950 83.636 1.06e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g01482 Myb_DNA-bind_6 2.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01482 K09422 - gmx:100817328 403.29