Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01459 ATGTTGTCGCCGCATCATAGTAGTGGCCACGACCAGATACTGCTGTTTCCTGCCCCTCCAACGCCATTGCCAATTGATCGAAGGTGGAAATCCAATGTCGAGCTTGCTCCCAATTGCCCGCGTTGTGCTTCTTCCAACACTAAATTCTGTTACTACAACAACTACAGTTTATCACAGCCCAGATACTTTTGTAAAGGCTGTAGAAGGTACTGGACCAAAGGTGGCTCTCTGCGCAACGTCCCCGTCGGCGGTGGTACCCGCAAAAGCCGCAGTGGGAAGGCGGTCAGGCACCCGCAAAATCATACTCGGAGCTTCGCTGGAAATTCGAGTTCTGAGGATAAAGAGCCAGTGGCTGATAAACCCAATCATGGATCTTGTGATATTGACATGGCCCTCGTGTTTGCAAAGTTTTTGAACCAAAACCACGCCTCTGCTCAAGAGTTGGACAATGGCTCTTCCTCCTCCAACTTATCCAATTCCCTTACGCCGGAGAGCGTTGAAAGTAGTGTGAACGATGTCGTACTTGTGGAGTCACAGAAGCACTTTGGTCATCATCCCGTGGCCATCACAGAGGAATTACTTCCGCAACAAGATCAAAATAGTATTCAGGATTTTGTTGGGGACGAATTGAGTGGGGTTGAGATGCAGGGATTATTGGATGTGGCCCAAGATGTGTTCTGGTCAGATCATGCTACGACGTCGTGTTTGGCTAACTGGCAATCTCCGATGATGCAAGTGCAGGACTTGGACTATTCCTTGCCCTTCCATGAGTATGATGCCGCTCTTCAATTACCACTTACTTCTTCTTCAATGAACCAAGTTACTGATGGGTGGTGGAGTACTTGGAGTTCCTGTGACCTTTCAACCTTGGAAGTCTTCTCAAGACCTTAA 891 0.4837 MLSPHHSSGHDQILLFPAPPTPLPIDRRWKSNVELAPNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGTRKSRSGKAVRHPQNHTRSFAGNSSSEDKEPVADKPNHGSCDIDMALVFAKFLNQNHASAQELDNGSSSSNLSNSLTPESVESSVNDVVLVESQKHFGHHPVAITEELLPQQDQNSIQDFVGDELSGVEMQGLLDVAQDVFWSDHATTSCLANWQSPMMQVQDLDYSLPFHEYDAALQLPLTSSSMNQVTDGWWSTWSSCDLSTLEVFSRP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01459 296 MobiDBLite consensus disorder prediction 145 164 - -
Bach3g01459 296 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Bach3g01459 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 32 172 IPR045174 GO:0003700|GO:0006355
Bach3g01459 296 Pfam Dof domain, zinc finger 38 90 IPR003851 GO:0003677|GO:0006355
Bach3g01459 296 MobiDBLite consensus disorder prediction 78 122 - -
Bach3g01459 296 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01459 Bach-Chr3 23928517 23929407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01459 31 229 C2C2-Dof Transcription Factor Family AT3G52440 43.478 3.47e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach3g01459 zf-Dof 5.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01459 - - qsa:O6P43_015057 260.381