Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01451 ATGATGGAACAGAGTATCCTATGCAAGTACACTGTTCATCACAGTGTGGCCAAGAAAATCACAAGGCCGGTGGCAGCTAAGAAGGATTTGCACTCGTATAATCCGATAGAGCCCAGAGTGGTACGGATATCCGTCACTGATCCTGATGCCACGGACTCTTCCAGCGATGAAGGAGGAGAATTCTTTGTTCGCCGGAGAGTGAAGCGGTATGTCAACCAAATTGACATCGAAACTAGCTGTAAAACTGCTGCCGTTTCCAATTCCCGGAAGAGAACCGCCGGAGATGTCCAGTCCTGCCGGCGGCCACTGAAAGTTTCTTCAACCTCAAACGGTCGAAAGTTTCGAGGTGTACGACAAAGGCCTTGGGGAAAATGGGCGGCTGAGATTCGAGACCCTGCACGCCGTATACGTCTGTGGTTGGGCACTTACGATACCGCTGAGGAAGCTGCTATGGTTTATGATAATGCTGCCATTAAGCTAAGAGGTCCCGATGCTTTAACAAACTTTGTTACTCCACCGCCTAGGGAAGAGACCCAAGTGGGCGAAACTGAAGCTGAAGTTGAAGTTGAGCTGGAAGTGAAGCCAGAAATGAATGAAGGGGTTAAGTCAGAAGCTTCTGGGTCAGGGTACGATTCAGGTGAAGAGCGCCTTCATCTACCATCTCCTACTTCAGTTCTCCAATTCCGATGCAATTTCAACGAGGAAATGGAAGTACAAAAGGCAGTGGAAATGGAAGAAAAAGTAGGCAAAGGAAAAGAGATGGATGATGTTTTGGGACAGCGGGAGTGTGAAGGGGAAACAACTTTTTTCCATGAAAACAGCGACTATTTCCTACTGGATGTGCCTTCACCGTTGCCACTGTGGGATGATGATGTGCTTAATTTCCCCACACCAGATTACTCGTCACTCTTTGAACAGGAGCCTTCTTCGTTCTTCAATGAAATTGAAGCCACGTCCATTCTACCGGACCAAGATTTCAGCGACGTTTTAACAGACTCTCACATATCCTACTCGCCATCCACCTTGTGCCAAGTGGACGACTTCCTCCAAGACATTTTGTTAGCGTCCGATCCTCTCGTCATTCTCTGA 1089 0.4803 MMEQSILCKYTVHHSVAKKITRPVAAKKDLHSYNPIEPRVVRISVTDPDATDSSSDEGGEFFVRRRVKRYVNQIDIETSCKTAAVSNSRKRTAGDVQSCRRPLKVSSTSNGRKFRGVRQRPWGKWAAEIRDPARRIRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFVTPPPREETQVGETEAEVEVELEVKPEMNEGVKSEASGSGYDSGEERLHLPSPTSVLQFRCNFNEEMEVQKAVEMEEKVGKGKEMDDVLGQRECEGETTFFHENSDYFLLDVPSPLPLWDDDVLNFPTPDYSSLFEQEPSSFFNEIEATSILPDQDFSDVLTDSHISYSPSTLCQVDDFLQDILLASDPLVIL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01451 362 CDD AP2 113 169 IPR001471 GO:0003700|GO:0006355
Bach3g01451 362 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Bach3g01451 362 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Bach3g01451 362 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Bach3g01451 362 FunFam Ethylene-responsive transcription factor 2 112 171 - -
Bach3g01451 362 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Bach3g01451 362 SUPERFAMILY DNA-binding domain 113 170 IPR016177 GO:0003677
Bach3g01451 362 Gene3D AP2/ERF domain 112 171 IPR036955 GO:0003700|GO:0006355
Bach3g01451 362 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 252 - -
Bach3g01451 362 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01451 Bach-Chr3 23880026 23881114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01451 8 355 AP2-EREBP Transcription Factor Family AT4G27950 40.771 2.66e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g01451 AP2 7.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01451 - - pcin:129303306 412.149