Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01446 ATGGATGATACTTTATCTGATTTTTTCGAAGACAAAGACTTTGGCGGAGATGATCTCTATGCTATTTTGGGGAGTCTCGAGGACTTCACTGATTTTCCTCCCATTGATGAAGCGGTTGTTAGCACAAAAGAGAACGAGGAAACCTCAAGATTGGTGTCTCAGAAATCAACCTCTTCCAGTGCTGTCCAAGAATATTCTGAAACTGAGCTTGAAACTTCACCCAAGAACAAGAGACAGAAGCTTGCAGCCACAACCTCGTCAGAGGAACCCAACTCAGATGGGCAACAAAGAATATCTCACATCACTGTGGAGCGAAACAGAAGGAAGCAAATGAACGAGCACTTGTCTGTTTTAAGGTCCCTTATGCCTTGCTTTTATGTCAAACGAGGAGACCAAGCTTCAATAATTGGAGGAGTGGTTGACTACATCAGTGAATTGCAGCAAGTTCTACAATCCCTGGAGGCCAAGAAACAAAGGAAAGTTTACACTGAAGTGCTTAGCCCTAGGCTAGTTTCAAGTCCAAGGCCTTTACCTCTAAGTCCAAGAAAACCACCATTGAGCCCGAGACTAAACTTACCCATTAGTCCAAGGACTCCACAACCAGGTAGCCCTTACAGGCCCAGGTTGCAACAACCAGGTTACCTCTCACCCACCATAGCCAACTCTCTTGAACCATCTCCTACATCTTCTGCTTCCTCCATCAATGACAATATCAACGAACTTGTTGCCAATTCCAAGTCTGCTATCGCCGATGTGGAGGTCAAGTTTTCCGGTCCTCACGTCCTTTTGAAAACTCTATCTCCTCGAATTCCCGGGCAAGCTCTGAAAATCATATCAACTCTTGAAGACCTAGCGCTCGAAATCCTCCATGTGAGCATTAGCACTGCTGAGGAAACCATGCTAAACTCATTCACTATTAAGATTGGAATTGAATGCCAACTGAGTGCTGAGGAACTTGCTCAACAAATCCAGCAAACATTCTGCTAA 987 0.4468 MDDTLSDFFEDKDFGGDDLYAILGSLEDFTDFPPIDEAVVSTKENEETSRLVSQKSTSSSAVQEYSETELETSPKNKRQKLAATTSSEEPNSDGQQRISHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYISELQQVLQSLEAKKQRKVYTEVLSPRLVSSPRPLPLSPRKPPLSPRLNLPISPRTPQPGSPYRPRLQQPGYLSPTIANSLEPSPTSSASSINDNINELVANSKSAIADVEVKFSGPHVLLKTLSPRIPGQALKIISTLEDLALEILHVSISTAEETMLNSFTIKIGIECQLSAEELAQQIQQTFC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01446 328 CDD bHLH_AtFAMA_like 98 169 - -
Bach3g01446 328 MobiDBLite consensus disorder prediction 77 98 - -
Bach3g01446 328 PANTHER TRANSCRIPTION FACTOR FAMA 5 327 IPR044283 GO:0003700|GO:0010052
Bach3g01446 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 166 IPR036638 GO:0046983
Bach3g01446 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 146 IPR011598 GO:0046983
Bach3g01446 328 FunFam Transcription factor SPEECHLESS 87 161 - -
Bach3g01446 328 Gene3D - 86 160 IPR036638 GO:0046983
Bach3g01446 328 Pfam Helix-loop-helix DNA-binding domain 96 147 IPR011598 GO:0046983
Bach3g01446 328 MobiDBLite consensus disorder prediction 174 206 - -
Bach3g01446 328 MobiDBLite consensus disorder prediction 41 98 - -
Bach3g01446 328 SMART finulus 101 152 IPR011598 GO:0046983
Bach3g01446 328 MobiDBLite consensus disorder prediction 51 69 - -
Bach3g01446 328 MobiDBLite consensus disorder prediction 172 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01446 Bach-Chr3 23823124 23824886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01446 1 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 52.101 8.86e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach3g01446 HLH 8.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01446 K20558 - rcu:8274388 459.529