Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01430 ATGTTCCACAAAATGAGTATACTGGTACTCATTCTCTTCCTTCTTCTTCTCTCATATCTGGTATCAAGCATAGAAACATGTTTAACTGGCGTTTGCCAGATGAACCAGCCCAAAATCCAATTCCCGTTTCGGATAAAGGGCCAGCAACCAAAGACATGTGGCTATCCGGGTTTTAGTGTATCCTGCAGTGAAGAAGGACAAACACTACTCAAGCTTCCTTATTCTGGAGAGTTCAGTATCCAAGGAATAGATTATTCCTTGCAAGAATTATGGGTGAATGATCCCAACAACTGCCTCCCAAAACGTATTCTCTCTCTTAACCTCTCTGGATCTCCTTTCGATGCCGTTTATTACCAAGAATTTGTCTTCTTTAACTGCTCCAGGGATTATCTGAGCTATCGTTTTAACCCAATAGCTTGCCTCAGCGGTTCCAGTTACACCGTTTTTGCCACATCTTCGACAAGGGTGGTTGTGTACTTGTCAGCAGTTTGCAATCTAGTTAGGAGAGTTAGGGTGCCTGTTCAGTGGCCGTTTTACGACGAGATATTGTCGTCTGACCTGAGCGACAACCTACTCCTGTCGTGGGATTCGCCGCCGTGTGGGAGGTGTGAGTTACAGGGTGGTCAGTGTGGGTTTAAGACTAATTCCAGTCTTGAAGTAGCCTGTTACAATGCTCCCTCCGGAGGGATTTCGCGGGGAGGGCGTTACGCGATCACCGTAGGCATGGGAGTGCCGGCGGTGTTGTGCTTTATTGGGCTTTTGTGGTACATGTGTGGCAGGTTAAGGGGCCGTTATTGGGCCAATGATACAGTTGCAAATTTCAACTCCCTTGCTGGGTTTCAGCCCAGAAGTATTTCAGGCCTTGATGGGCCTACGATTGAGTCATACCCAAAAATCGTGCTTGGGGAGAGCAGACGCCTACCCGAGCGGGATGATAATACGTGCCCGATTTGCTTGTCGGAGTATGCGCCGAAAGAGACCGTCAAGAGCATACCCGAATGTCAACATTGCTTCCATGCAGAGTGCATTGATCAATGGCTTCGATTGAATGCTTCGTGCCCAATTTGCCGGACTTCTCCTCCCAAGTGA 1089 0.4793 MFHKMSILVLILFLLLLSYLVSSIETCLTGVCQMNQPKIQFPFRIKGQQPKTCGYPGFSVSCSEEGQTLLKLPYSGEFSIQGIDYSLQELWVNDPNNCLPKRILSLNLSGSPFDAVYYQEFVFFNCSRDYLSYRFNPIACLSGSSYTVFATSSTRVVVYLSAVCNLVRRVRVPVQWPFYDEILSSDLSDNLLLSWDSPPCGRCELQGGQCGFKTNSSLEVACYNAPSGGISRGGRYAITVGMGVPAVLCFIGLLWYMCGRLRGRYWANDTVANFNSLAGFQPRSISGLDGPTIESYPKIVLGESRRLPERDDNTCPICLSEYAPKETVKSIPECQHCFHAECIDQWLRLNASCPICRTSPPK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01430 362 ProSiteProfiles Zinc finger RING-type profile. 315 357 IPR001841 -
Bach3g01430 362 CDD RING-H2_EL5-like 315 357 - -
Bach3g01430 362 SMART ring_2 315 356 IPR001841 -
Bach3g01430 362 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 360 IPR046948 -
Bach3g01430 362 SUPERFAMILY RING/U-box 306 359 - -
Bach3g01430 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 361 IPR013083 -
Bach3g01430 362 Pfam Ring finger domain 313 357 IPR001841 -
Bach3g01430 362 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Bach3g01430 362 Pfam Wall-associated receptor kinase C-terminal 169 224 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01430 Bach-Chr3 23681381 23683667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01430 25 360 C3H Transcription Factor Family AT2G46495 38.551 3.19e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01430 - - qsa:O6P43_015016 487.263