Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01426 GAAGCCCTAACCGAGGGAGAATGTCGTCGACGCTGCTGGAGGTGACTCGGGCAGCACACGAGGATGTGGAGCGTCTCGAGCGGCTCATAGTGAAGGACCTCCAGAATGAGCCGCCCGCCTACAAGGAGCGCCTGTTTCAGAGTCACCGTGTTCGAAACATGATAGATACTATTATCTCTACCACTGAAAACCTCGTTGAGATATATGAAGATAAAGACAATGCTAGGAAGGATGAAATTGCTGCACTAGGAGGTCAAACTGCAACTGGAACAAATGTATTTAGTGCCTTTTATGATAGACTGAAAGAGATACGAGAGTATCATAGAAAGCACCCTGCTGCACGTGTTGTGGATGATGGTGAGGAGTCTGAAGCACTACTTAAGGAGGAACCTCAAATTGAATTTAGCGGAGAGGAAGCTTCTGGTCGATACTTAGATTTGCATGAACTGTACCATCAGTTCATCAATTCCAAATTCGGAGAGCCAATTGAGTACTCTGCTTACCTTGATGTTTTCTCGCAAACAGATAAGATTCCTCACAAAATGAAAATGACACGGCAGTACAGGGAATATATGGAGGGTCTTTTGGAGTATCTAATTTACTTTTTTCAGCGGACTGAACCCTTGCAAGATCTTGATCGTATTTTCTTGAAGGTATTGTCTGAGTTTGAAGGAGATTGGGCAATTGGCAAGGTTCCAGGATGGGAGAATGACAACCAAGAGAATGGACATGTACCTGCACAGCATGCTGTAATTGATCTTGATTATTACAGTACAGTTGAAGAGCTGATGGAAGTTGGTCCTGAAAAGTTAAAGGAGGCACTGGCTGCATTGGGACTTAAGACTGGCGGTACTGTTCAGCAACGTGCTGAGAGATTGTTCCTTACAAAGCATACACCTCTTGAGAAGTTGGACAAGAAGCATTTTGCAAAGGGGCCACGGGGTTCTGATAAAAAATGGCCTGCTGCAGTGCCGCAACAAGATGAAAATTCAAAAGAAATTGCACTGATGGAGGCCAAAATGATAAGACTATGTGATTTTCTGACGGATACAATTACAAGAACAAAAGACAACGTTGTGAAGAAGCAAGCCCTGACATATGAGGAACTTGAAGCAGAACGTGGGGAGGAAGAGACTCAAGAGGACACTGAGAGTGAAGATGAAGAGCAGCAGATATATAATCCCCTAAAATTGCCAATGGGATGGGATGGAAAACCCATTCCTTATTGGCTGTATAAGCTACACGGTCTTGGTCAGGAATTCAAATGTGAGATATGTGGCAACTACAGTTATTGGGGTCGCAGAGCGTTTGAACGGCATTTTAAAGAATGGCGCCATCAACATGGGATGCGCTCTCTTGGTATACCAAATACTAAGAACTTCAATGAAATTACATCAATTGAGGAAGCAAAAGAACTGTGGAAGAGAATACAAGAAAGGCAAGGACTAAACAAGTGGCGCCCAGATCTAGAAGAAGAATATGAAGACAAAGAAGGCAATATATACAACAAGAAAACATATACTGATCTACAGCGCCAGGGCTTAATATGA 1550 0.4335 MSSTLLEVTRAAHEDVERLERLIVKDLQNEPPAYKERLFQSHRVRNMIDTIISTTENLVEIYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRKHPAARVVDDGEESEALLKEEPQIEFSGEEASGRYLDLHELYHQFINSKFGEPIEYSAYLDVFSQTDKIPHKMKMTRQYREYMEGLLEYLIYFFQRTEPLQDLDRIFLKVLSEFEGDWAIGKVPGWENDNQENGHVPAQHAVIDLDYYSTVEELMEVGPEKLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKKHFAKGPRGSDKKWPAAVPQQDENSKEIALMEAKMIRLCDFLTDTITRTKDNVVKKQALTYEELEAERGEEETQEDTESEDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRSLGIPNTKNFNEITSIEEAKELWKRIQERQGLNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01426 509 MobiDBLite consensus disorder prediction 301 320 - -
Bach3g01426 509 PANTHER SPLICING FACTOR SF3A-RELATED 245 311 - -
Bach3g01426 509 MobiDBLite consensus disorder prediction 363 383 - -
Bach3g01426 509 Pfam Splicing factor SF3a60 binding domain 80 105 IPR021966 -
Bach3g01426 509 MobiDBLite consensus disorder prediction 364 382 - -
Bach3g01426 509 Pfam Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 127 175 IPR031774 -
Bach3g01426 509 Pfam Replication stress response SDE2 C-terminal 223 304 IPR025086 -
Bach3g01426 509 ProSiteProfiles Zinc finger matrin-type profile. 414 445 IPR000690 GO:0003676|GO:0005634|GO:0008270
Bach3g01426 509 Coils Coil 353 380 - -
Bach3g01426 509 Pfam SF3a60/Prp9 C-terminal 390 509 IPR024598 GO:0000398|GO:0003723|GO:0005681
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01426 Bach-Chr3 23643746 23651396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01426 1 509 C2H2 Transcription Factor Family AT5G06160 74.853 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01426 K12827 - gmx:100815393 870.152