Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01423 ATGATAATCAAACGGAACCTGAAATCCCAAATGCCGAGTCTGAAACGTTGCAAACTCGGTGACTCGGTCGGGGATGAAGATGATACCTATGTAGCTCGGAAGAAGAGGAGGACAAATGGGTATTACCCTCTGAATCTTCTTGGCGATGTCGCTGCTGGTATAATTCCTGTGAGCTTTCATGGTTTGCTGAGTGCTGGTGTATCTGAAAAGGGCTTTTCTGCATCGTGGTGCACCGAGGTCTCGTGCTCCCATGGTGAAGTGGAGTCAAAGTCCAAGGGTGAGAATTCTATCCGAACAAAGATGAGTAGGCCTGCAGAGGTTTCACGGCCACCTCTCGTGAGGACGTCAAGAGGTAGAGTGCAGGCACTCCCTTCACGTTTTAACGATTCCGTTATCGAGAATTGGAAGAAAGAGACTAAGAGTAGCGTGCGTGATTATGGTTTTGATGAGGAATTTGAATGTAGAAAGGAGAATTTTAGTTTTAAGACACCGAAAGCATACAATCAGAATACAAAGAAAGGGAGAAACGATGAGAAAATTGGCTACAAGTCTCGCAAATATCGGACATTGCGTGAAGAGGAGGCAAGAGAGGATGGGCGTGTTCGGTATAAGAATTTTGATATCCGGAAGTATTCAACTCCACGTACTACAATGACCTCAATGCATGAGCAATCAGTTGAACATGAGAAAAGCCTATTTGTAGATATAGAGGAAGATGATTTAACCGGCAGTGAGATGTTTTCGAAGAAGAATGACAAGAAGAAAGATGGACTATATGGACCCGAAGACTTCTATGCAGGTGATATAGTGTGGGCCAAAGCGGGGAAAAGGGAGCCTTTTTGGCCAGCCATTGTCATTGATCCAATGTCTCAGGTCCCTGAGCTGGTTCTGAGGTCTTGTATAGCAGATGCAGCTTGTGTGATGTTTCTTGGGTACTCTGGGAATGAAAATCAAAGGGACTATGCATGGGTGAAGCATGGGATGATTTTTCCATTTACAGATTATGTAGACAGGTTTCAGGGGCAGCCTGAATTGAGTTACGACAACTCCTCTGATTTCCAAATGGCAATAGAGGAGGCATTTTTGGCAGATCAGGGGTTTACCGAGAAGCTGATTGCAGATATAAATACAGCAGCTGGTAACACAGGTTATGATGAAACTATTCTAAAGAGCTTTCTGGAGGCCACTGGTTCAAACCAAGACGCAGGTTACCACTTTCTGAATCAGGATCTATTTGATAGGAAGAAAGACATGCGAACCTGCAAAGCCTGTGGAATGGATCTTCCTTTCAAAATGTCAAAGAAAATGAAGGATTCAGCACCTGGTGGCCAATTTCTATGTAAAACATGTGCTAGGTTAACAAAATCAAAACATTACTGTGGCATATGCAAGAAAATTTGGAATCATTCGGATAGTGGAAGCTGGGTGCGATGTGATGGATGTAAGGTGTGGGTGCATGCCGAATGTGACAAAATTTCCAGCAACCTTTTTAAGAATCTTGGAGGCACAGATTATTACTGCCCAACTTGCAAAGCGAAGTTTGATTTTGAGTTATCTGATTCGGAAAAATCTAAGCCAAAAGTCAAATGGAACAAAAACAGTGGGCAGAACAATGGGCAGCTAGTGCTGCCAAACAAGGTCACAGTTCTCTGCAATGGTGTGGAGGGCATATATTTTCCAAGCCTTCACTCAGTTGTATGCAAGTGTGGATTTTGTGGGACAGAAAAGCAAGCACTTAGTGAATGGGAACGGCACACCGGTTCCAAATCAAGAAATTGGAGAACAAGTATTAGGGTGAAAGACTCCATGCTGCCACTGGAACAATGGATGCTGCAGTTGGCAGAATTCCATGCAAATGCCCTAGTTTCTGTCAAACCTAAAAAGCCTTCTTTAAAAGAAAGGAAGCAGAAGCTGCTAACATTTTTGCAAGAGAAGTATGAACCTGTTTATGCAAAATGGACAACAGAACGGTGTGCTGTATGTAGATGGGTTGAAGATTGGGACTACAACAAAATTATCATTTGTAATAGATGCCAAATAGCTGTTCATCAAGAATGCTATGGGGCAAGAAACGTTCGGGATTTTACATCATGGGTTTGTAAAGCGTGTGAAACACCTGAAATCAAGCGTGAGTGTTGTCTTTGTCCTGTCAAAGGTGGAGCTCTAAAGCCAACTGATGTCGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTCTCTTTTGCCAGTGATGAAAAGATGGAGCCTGCTCTGGGTATTCTGAGCATTCCATCAAATTCTTTCGTGAAGATTTGTGTAATTTGTAAGCAAATTCATGGTTCTTGTACACAATGTTGCAAGTGTTCTACTTATTTCCATGCCATGTGTGCATCAAGAGCAGGGTATCGTATGGAGCTGCATTGCTCGGAGAAAAGTGGTAGACAGACAACGAAAATGGTTTCTTATTGTGCTTACCACAGGGCTCCAAATCCAGATACTGTTTTGATTATACAAACCCCTCTCGGGGTTATTTCAGCCAAAAGCCTTCTCCAAAATAAGAAAAAATCTGGGTCTAGGTTAATTTCATCTAAAAGAACAAAGCCAGAAGATACTCCTCCTGTAGATAACACTGGGGAAGAGCCATTCTCTGCTGCTAGGTGCCGCATCTTTCAAAGAACGAATCCTAGCAAAAAGAGAGCAGCAGATGAAGCCGTTGCCCATCGGGTGAAGGGTCACTTCCATCATCCTTTAGATGCAATACAGTGTTTAAATGCTTACAGAGTGGTACAGGAAGAACCTCAGACGTTTTCTTCTTTTAGGGAACGTCTTCACCACTTACAGAGAACCGAAAACGAGCGGGTTTGCTTTGGGACGTCAGGCATACATGGATGGGGCCTTTTTGCGCGTAGGAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGGGAACAAGTGAGACGCAGCATCGCAGATCTGAGGGAAGTACGGTACAGATTAGAACGCAAAGACTGCTATCTGTTTAAGATAAGTGAAGAAGTGGTGGTAGATGCCACCGACAAAGGAAATATAGCGCGGCTAATCAACCATTCTTGCGCTCCCAATTGCTATGCAAGGATCATGAGTGTGGGTGACGACGAGAGTCGGATTGTCCTCATTGCCAAGACCAACGTATCCGCTGGAGATGAACTAACGTACGACTACTTGTTTGATCCAGACGAGCCTGATGAATTTAAGGTCCCTTGTTTATGTAAAGCTCCCACTTGCCGGAAATTCATGAATTGA 3276 0.4353 MIIKRNLKSQMPSLKRCKLGDSVGDEDDTYVARKKRRTNGYYPLNLLGDVAAGIIPVSFHGLLSAGVSEKGFSASWCTEVSCSHGEVESKSKGENSIRTKMSRPAEVSRPPLVRTSRGRVQALPSRFNDSVIENWKKETKSSVRDYGFDEEFECRKENFSFKTPKAYNQNTKKGRNDEKIGYKSRKYRTLREEEAREDGRVRYKNFDIRKYSTPRTTMTSMHEQSVEHEKSLFVDIEEDDLTGSEMFSKKNDKKKDGLYGPEDFYAGDIVWAKAGKREPFWPAIVIDPMSQVPELVLRSCIADAACVMFLGYSGNENQRDYAWVKHGMIFPFTDYVDRFQGQPELSYDNSSDFQMAIEEAFLADQGFTEKLIADINTAAGNTGYDETILKSFLEATGSNQDAGYHFLNQDLFDRKKDMRTCKACGMDLPFKMSKKMKDSAPGGQFLCKTCARLTKSKHYCGICKKIWNHSDSGSWVRCDGCKVWVHAECDKISSNLFKNLGGTDYYCPTCKAKFDFELSDSEKSKPKVKWNKNSGQNNGQLVLPNKVTVLCNGVEGIYFPSLHSVVCKCGFCGTEKQALSEWERHTGSKSRNWRTSIRVKDSMLPLEQWMLQLAEFHANALVSVKPKKPSLKERKQKLLTFLQEKYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKACETPEIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCSEKSGRQTTKMVSYCAYHRAPNPDTVLIIQTPLGVISAKSLLQNKKKSGSRLISSKRTKPEDTPPVDNTGEEPFSAARCRIFQRTNPSKKRAADEAVAHRVKGHFHHPLDAIQCLNAYRVVQEEPQTFSSFRERLHHLQRTENERVCFGTSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREVRYRLERKDCYLFKISEEVVVDATDKGNIARLINHSCAPNCYARIMSVGDDESRIVLIAKTNVSAGDELTYDYLFDPDEPDEFKVPCLCKAPTCRKFMN 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01423 1091 ProSiteProfiles PWWP domain profile. 266 335 IPR000313 -
Bach3g01423 1091 ProSitePatterns Zinc finger PHD-type signature. 658 703 IPR019786 -
Bach3g01423 1091 Pfam PHD-finger 459 512 IPR019787 -
Bach3g01423 1091 ProSiteProfiles SET domain profile. 949 1066 IPR001214 GO:0005515
Bach3g01423 1091 SUPERFAMILY SET domain 939 1091 IPR046341 -
Bach3g01423 1091 FunFam Histone-lysine N-methyltransferase 707 826 - -
Bach3g01423 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 649 706 IPR013083 -
Bach3g01423 1091 Pfam PWWP domain 267 360 IPR000313 -
Bach3g01423 1091 SMART set_7 949 1072 IPR001214 GO:0005515
Bach3g01423 1091 ProSiteProfiles Extended PHD (ePHD) domain profile. 709 824 IPR034732 -
Bach3g01423 1091 ProSiteProfiles Post-SET domain profile. 1075 1091 IPR003616 -
Bach3g01423 1091 Pfam PHD-zinc-finger like domain 711 823 - -
Bach3g01423 1091 SUPERFAMILY Tudor/PWWP/MBT 259 363 - -
Bach3g01423 1091 FunFam Histone-lysine N-methyltransferase 923 1091 - -
Bach3g01423 1091 Pfam PHD-finger 670 704 - -
Bach3g01423 1091 SMART PHD_3 657 704 IPR001965 -
Bach3g01423 1091 SMART PHD_3 459 511 IPR001965 -
Bach3g01423 1091 SMART PHD_3 768 824 IPR001965 -
Bach3g01423 1091 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1091 IPR025780 -
Bach3g01423 1091 CDD ePHD_ATX3_4_5_like 712 823 IPR041955 -
Bach3g01423 1091 Gene3D - 261 367 - -
Bach3g01423 1091 ProSiteProfiles Zinc finger PHD-type profile. 655 706 IPR019787 -
Bach3g01423 1091 MobiDBLite consensus disorder prediction 88 116 - -
Bach3g01423 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 452 515 IPR013083 -
Bach3g01423 1091 ProSiteProfiles Zinc finger PHD-type profile. 457 513 IPR019787 -
Bach3g01423 1091 CDD PWWP_AtATX3-like 265 369 - -
Bach3g01423 1091 MobiDBLite consensus disorder prediction 852 875 - -
Bach3g01423 1091 FunFam Histone-lysine N-methyltransferase 645 706 - -
Bach3g01423 1091 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 707 826 IPR013083 -
Bach3g01423 1091 Pfam SET domain 960 1065 IPR001214 GO:0005515
Bach3g01423 1091 Gene3D SET domain 843 1091 IPR046341 -
Bach3g01423 1091 CDD SET_SETD1-like 936 1087 - -
Bach3g01423 1091 SUPERFAMILY FYVE/PHD zinc finger 458 514 IPR011011 -
Bach3g01423 1091 CDD PHD_ATX3_4_5_like 657 703 IPR042011 -
Bach3g01423 1091 CDD PHD_TCF19_like 460 510 - -
Bach3g01423 1091 PANTHER PHD FINGER PROTEINS 22 513 - -
Bach3g01423 1091 SUPERFAMILY FYVE/PHD zinc finger 656 720 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01423 Bach-Chr3 23615475 23623906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01423 658 823 C2H2 Transcription Factor Family AT3G14740 33.526 1.34e-20 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach3g01423 zf-HC5HC2H_2 2.7e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01423 - - qsa:O6P43_015012 1890.16