Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01392 CTTTTCCCTTCCATGGACACAACTCAGTGGGCACAGGGGATTGGAGTGGTTAAACCTATGGAAGGTTCAAAGCCTCCTATGTTGGAGAGAAGAGCAAGGCCTCAGAAAGATCAAGCTGTGAACTGCCCAAGGTGCAATTCAACAAACACTAAATTCTGTTACTACAATAACTATAGCCTCTCTCAACCAAGGTACTTTTGCAAGACTTGTAGAAGGTATTGGACTGAGGGTGGGTCTTTGAGAAATGTTCCCGTGGGTGGAGGTTCAAGAAAGAACAAGAGATCAATATCTTCATCTTCATCATCAACACCTTCATCACAAGCAGCTCCATCATCAGCAAAGAAGCTTCCTGATCTGACAGCACCAAATTTCCCTCCATCTACTTCTCAAAACCCAAAGATCCATCAAGGGCAAGATCTTAACTTAGCATACCCACCAGCTGAGGACTACAACACCATATCTAAATTCATTGAGGTTCCTTATAGTACTGAAGACAAGAGTCATCACCTTCAAAATCCCAGTTCCTCGTCTGCACCTTCTCAGTTGTCTGCTATGGAGCTCCTCAAAACTGGGATTGCTTCATCAAGGGGTTTGAATTCTTTCATGCCCTTGTCAGTGTCAGATTCCAGCACAATGTATAATTCAACTGGGTTTTCTTTGCAAGACTTCAAGCCGCCAAGTCTTAACTTTACTCTTGAGGGGTTTGAAAATGGATATGGGGGTCTTCAGGGAATTCAAGAGGGCACTGGTGCAAGGATCTTGTTCCCTGTTGAGGATTTGAAGCAGGTTCCAAGTACTACTGAGTTTGAGCAGAATAGAAGCCAAGCAGATTCAACTGGGTATTGGAATGGCATGTTAGGTGGAGGATCATGGTAGATAATAGAGAAGCCCAAAAAAAAGAAATGCAAAAGAAGAAAGGTGAACAAGGGATTGGTGTTTTTTATCCTTTGTTTTTCTCTTCCCTAATTTCATGAGTGACGGTTTGGAGTGATGATCTGATCAAGTGAACCACTAACAAATAGGTACATGGTTTTTCTGTTTTGGTTCTCTAATCCATTTGAGTTTGGGGTTCTTCCTTTTTCTTCCTTGATTTTACCTGGATGCATATGTTTGAAGCTTCCTTTTAGGTTACCTTCGGTTCAGGAGGCTACAGGCCATCATTAATTGCACGACCCATCTACCTTCTTTATTTTTATTTTTTTTTGGTTTTCTCTTATGACGAGAACTCTAGTACTTTGGGCTATATTTCACCTGGATCTTCGCGCACGGTTTGCATATATCACAGCAACAAATATGCTCTCTAACAGGTCAGTATCTGCAGAAATACTATTGTTCCTTATTGTCAGCTGGTACCCAGAGAGATTCGTCGGCAGGGTGTGCAGTTTAATCCTAGTTTTTATTAAGATGCAGGTTAGTGCACATAATAACAAGCTTTAATCTCTTTATGTGGAAATTGTAACTGGGATTTGAGGTTGATCTGGGTCATTTTTATTTGGGTTTTTATTAATTAATCCAAGGAACAAAAAGTGAGTTGGAA 1537 0.4099 MDTTQWAQGIGVVKPMEGSKPPMLERRARPQKDQAVNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSSSSTPSSQAAPSSAKKLPDLTAPNFPPSTSQNPKIHQGQDLNLAYPPAEDYNTISKFIEVPYSTEDKSHHLQNPSSSSAPSQLSAMELLKTGIASSRGLNSFMPLSVSDSSTMYNSTGFSLQDFKPPSLNFTLEGFENGYGGLQGIQEGTGARILFPVEDLKQVPSTTEFEQNRSQADSTGYWNGMLGGGSW 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01392 287 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Bach3g01392 287 MobiDBLite consensus disorder prediction 118 133 - -
Bach3g01392 287 MobiDBLite consensus disorder prediction 77 133 - -
Bach3g01392 287 Pfam Dof domain, zinc finger 33 90 IPR003851 GO:0003677|GO:0006355
Bach3g01392 287 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Bach3g01392 287 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 178 IPR045174 GO:0003700|GO:0006355
Bach3g01392 287 MobiDBLite consensus disorder prediction 14 35 - -
Bach3g01392 287 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01392 Bach-Chr3 23398165 23400242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01392 23 287 C2C2-Dof Transcription Factor Family AT3G61850 46.127 4.04e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach3g01392 zf-Dof 1.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01392 - - qsu:112023740 418.698