Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01384 ATGGCAAACCCAAGCTTCTATACTTACGAGTTCCTGAATCAGCCCTCACAATCAAAACCCACATACACAAAGAACAAGCCACACCCTCCTCCTACTGCTTCTCCTCGCACATTCACATGCAAATACTGTCAACGCAGGTTCTATAGCTCCCAAGCTCTTGGTGGGCACCAAAATGCCCACAAGCGCGAGAGAGCCGCAGCTAGACAAAACGTTTCTGCCCAGCAAGCAGCTCGGTTTGGGGCTCCCACCCGCACTGGTGAGCTCATTATGGAACCAGTCTCAGGTCGTTTCTTCCACCCCCATTTGCTGCAATCTTTGGAGACAGACCATGACATTGGTGCAAGTTCACTCACTTTTGGCTTTCATGGAGTCTCCAGCTCTGAGGTTCTCCCCCTTAGCCCTGAGCAGCACGTCAATGTTGACCTCACCCTTCGCTTGTGA 441 0.517 MANPSFYTYEFLNQPSQSKPTYTKNKPHPPPTASPRTFTCKYCQRRFYSSQALGGHQNAHKRERAAARQNVSAQQAARFGAPTRTGELIMEPVSGRFFHPHLLQSLETDHDIGASSLTFGFHGVSSSEVLPLSPEQHVNVDLTLRL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01384 146 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 20 83 IPR044246 GO:0009788
Bach3g01384 146 Pfam C2H2-type zinc finger 38 62 - -
Bach3g01384 146 MobiDBLite consensus disorder prediction 53 84 - -
Bach3g01384 146 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Bach3g01384 146 MobiDBLite consensus disorder prediction 15 36 - -
Bach3g01384 146 Gene3D Classic Zinc Finger 14 85 - -
Bach3g01384 146 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Bach3g01384 146 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01384 Bach-Chr3 23349335 23349775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01384 33 69 C2H2 Transcription Factor Family AT1G80730 75.676 8.56e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach3g01384 zf-C2H2_6 1.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01384 - - vvi:104881652 102.064