Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01374 CATAATCCTTCATTTACAAGTTCCAATAACGTGATAGAAATGGCCTTGAGAGATAGTTTCCTTATGGCTAGCTATATATTTTGCACCAGATTCCCTTGAGCAAACTTTTAAAGCACAATTTGTTGGGAACCAACAGCTACATATAGTCTAGCCAGCAACGAATTCACGCTTAGATTTTGAAATACTCTTCTCTCTCAGTGATCACAAGCTAAATGATGGAGGGCGATGAGTGTATTCAAGCATCAAAGGAGGAAAACGTTGAAAGCTTCACCAATTCAGAGTTACCTCAAAATCCAAGGAAGAAAAAGAGCAAGATAGAGAATAAGAGGAGGTTTAGTGATGAACAAATCAGATCACTTGAATGCATATTTGAGTCAGAATCAAGATTAGAGCCAAGTAAGAAGATGCAACTAGCTAGAGATCTTGGGTTGCAACCACGCCAAGTTGCCATATGGTTTCAGAATAGAAGAGCCAGATGGAAATCAAAACGGATAGAGCAAGAATACAGGAAACTCAAAGATGAGTATGACTGCTTAGCATCTCGGTTTGAGTACTTAGAAAAAGAGAAGGAGTCCTTGCAAATAGAGTTGCAGAAGCTAAGTGATATAATGGAGAAATCTGTTGATGGGAAAAAGGAATGCAGAAGAAGGGTTGCTGAGGATAATAGCACCGAGGATGGTGACTCAGGGAGTGGACACAGCAATTGGAGAGGTGATGAAGCAAAACCCAGTAATTCAAGTGAGGGTTTTGAGGACAGAGAAGCCATGCATTCACATGATGAAAATGAAAAGAGAGAAAAGACTGGGTATTCTGAGGACAGGGAACACCAAATTCAGAAAATGGAGGAGCATGAGCATGTGCAGGTCCCCTTGGCATCACTTGAAAAATGGTATAGTGTGGATCCTAGTGGTCTCTTTGATCAGTCTTGTAGCAGTTCACAATGGTTGGATTTCTGGACTTGAATGTTTGCTTGTTTAGTTGAAGAAGTAACAAGGACTGGAACTGGATGGCTCTTACCTTATGGCCCCTGCATTTCATGAAATCCAAGCCCAAGAAGGAATTGGAGTGGAAATTTAGTTCTGGATTGCTCAAGAAAATCAAGGTTGAGATCTTGAAGGCTTTGAGATGATATGCAGAGAATGAAGATAGTCTCACTCAAAATGTTAATAGATTTGGAAGAAGAAAGAATATGCCATGTTTCTGCTTGCATGACTTTTACATTGTTTGTGTGATTTTCTTTTTTCCTTACTTGGTTTAGCGAGGGGATCAACCCCAAAACTTGTGCTCTTACTACTTAAGGTGTTGATTAACTTGAAAGTAATAGAAATTTTAGAGAAAAAA 1341 0.3945 MMEGDECIQASKEENVESFTNSELPQNPRKKKSKIENKRRFSDEQIRSLECIFESESRLEPSKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDCLASRFEYLEKEKESLQIELQKLSDIMEKSVDGKKECRRRVAEDNSTEDGDSGSGHSNWRGDEAKPSNSSEGFEDREAMHSHDENEKREKTGYSEDREHQIQKMEEHEHVQVPLASLEKWYSVDPSGLFDQSCSSSQWLDFWT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01374 249 MobiDBLite consensus disorder prediction 173 216 - -
Bach3g01374 249 Gene3D - 36 97 - -
Bach3g01374 249 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 28 190 IPR045224 GO:0003700
Bach3g01374 249 FunFam Homeobox-leucine zipper protein ATHB-7 17 92 - -
Bach3g01374 249 CDD homeodomain 38 93 IPR001356 GO:0003677
Bach3g01374 249 Pfam Homeobox associated leucine zipper 92 133 IPR003106 GO:0006355|GO:0043565
Bach3g01374 249 SMART HOX_1 35 96 IPR001356 GO:0003677
Bach3g01374 249 Coils Coil 84 132 - -
Bach3g01374 249 MobiDBLite consensus disorder prediction 1 38 - -
Bach3g01374 249 SUPERFAMILY Homeodomain-like 22 92 IPR009057 -
Bach3g01374 249 MobiDBLite consensus disorder prediction 140 216 - -
Bach3g01374 249 PRINTS Lambda-repressor HTH signature 72 88 IPR000047 GO:0003677
Bach3g01374 249 PRINTS Lambda-repressor HTH signature 63 72 IPR000047 GO:0003677
Bach3g01374 249 ProSiteProfiles 'Homeobox' domain profile. 32 92 IPR001356 GO:0003677
Bach3g01374 249 ProSitePatterns 'Homeobox' domain signature. 67 90 IPR017970 GO:0000981|GO:0006355
Bach3g01374 249 MobiDBLite consensus disorder prediction 140 164 - -
Bach3g01374 249 Pfam Homeodomain 38 90 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01374 Bach-Chr3 23303085 23304518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01374 37 249 Homeobox Transcription Factor Family AT2G46680 41.350 5.37e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach3g01374 Homeodomain 3.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01374 K09338 - gmx:100793260 333.954