Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01342 ATGAAGATAAGCTTCGCTGCTGGCATAGTGAAACCCAGTTCTTTGCTTGTGCAAACAAAAATGCCTATTCCAACATTTGGTAGTTCCAATTTGAGTGTTACTTCAGCTCTTCGGTTATCATGTAACCGGGTGGCAGGAATGGGGTTGATTACAAGATTTCAGCATTCTGTTACTGATAGAACCTTGACTTCTAGGTCTGTGGATTCACCGTCTTCCAAACCAGGCTCCACTCGCTTGAATAGGAAACAGGAACGTTCCTCATCATCATTGTATAGTCGTCCTAGTTTATCAGATATGAAGAAAGATAGGATAGCAAATCGTGATAAGGTTTACGAATTTTTGAGGGGAATTGGTATTGTTCCTGATGAGCTTGACGGTTTGGAACTTCCAGTAACAGTTGAGGTTATGAGGGAACGTGTAGATTTTCTTCACAATTTAGGGCTTACAATAGAAGACATTAACAACTATCCACTTGCTCTTGGCTGCAGTGTCAAGAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGTGTCAGGAAATCTACATTCACACAGTTCTTGAGGAGATATCCACAAGTTCTTCATGCCAGTGTTGTGATTGACCTTCAACCAGTGGTCAAGTATCTTCAGGGGATGGATATAAAGCCCATTGATATTCCTCGGGTTCTTGAGAGGTACCCAGAAGTGCACGGATTCAAGCTTGAGGGAACCACGAGCACGTCAGTCGCTTATTTGGTTGGAATTGGTGTAGCAAGAAGAGAAATTGGAGGGCTTTTGACTAGATATCCTGAGATTTTGGGAATGCGAGTTGGCAGAGTGATCAAGCCTTTTGTGGAATATCTGGAAAGCTTTGGAATTCCAAGATTGGCCATTGCTAGACTGATAGAGAAACGACCTCACATGCTTGGCTTTGGATTGAACGAGAAGGTAAAGCCAAATGTCGAATCCCTTGAAGAGTTTAATGTTAGAAGAATATTAGTTCCCTCTGTGATTGCTCAGTATCCCGAGATTATTGGAATTGACTTAAAACCAAAGCTTGTCAATAAAAGGAATTTACTCAATTCTGTACTTGATATGGATCATGAAGATTTTGGCAGAGTTGTTGAGAAGATGCCGCAGGTAGTTAGCCTCAGCAGTGCACCTATGATGGGGCATGTTGATTTTCTTAAAAATTGTGGATTTTCCTTGCCACAAATGAGAGAGATGGTTGTTGGATGCCCACAACTGCTTGCTTTAAATATTGACATCATGAAGCTTAGCTTTGGTTACTTCCAAATGGAAATGAAAAGGCCTTTGGAAGATTTGGTTGCTTTCCCTGCATTCTTCACTTATGGCTTGGAGTCAACTGTAAAACCTAGGCACAAGATGGTTTCCAGGAAGGGATTGAAGTGTTCTCTTGCATGGATGCTTAATTGTTCTGATGAGAAATTTGAGCAACGAATGAATTATGACACTTTTGACATGGAGGAGATGGGAATGGAACCGTCATTTGACATGAATTCACTGATGGAACCAAGGAGTGATGAGTCAGGTTCTGATTATGAATATAGTGATGATGATGATGAAGATAAGAATGATGAAGTTTCTACTACCACTTGTCTACCTGGGAGAATCAAGGCCTTCTCTAAGAGGATTTTATTTGGAGAGTATCAATCTCTACATCTAATGCATTTAAAATTGTTTTGA 1692 0.4054 MKISFAAGIVKPSSLLVQTKMPIPTFGSSNLSVTSALRLSCNRVAGMGLITRFQHSVTDRTLTSRSVDSPSSKPGSTRLNRKQERSSSSLYSRPSLSDMKKDRIANRDKVYEFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLALGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVIDLQPVVKYLQGMDIKPIDIPRVLERYPEVHGFKLEGTTSTSVAYLVGIGVARREIGGLLTRYPEILGMRVGRVIKPFVEYLESFGIPRLAIARLIEKRPHMLGFGLNEKVKPNVESLEEFNVRRILVPSVIAQYPEIIGIDLKPKLVNKRNLLNSVLDMDHEDFGRVVEKMPQVVSLSSAPMMGHVDFLKNCGFSLPQMREMVVGCPQLLALNIDIMKLSFGYFQMEMKRPLEDLVAFPAFFTYGLESTVKPRHKMVSRKGLKCSLAWMLNCSDEKFEQRMNYDTFDMEEMGMEPSFDMNSLMEPRSDESGSDYEYSDDDDEDKNDEVSTTTCLPGRIKAFSKRILFGEYQSLHLMHLKLF 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01342 563 FunFam Transcription termination factor mterf4, chloroplastic 136 273 - -
Bach3g01342 563 SMART mt_12 367 397 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 330 362 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 87 120 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 434 465 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 Gene3D Transcription termination factor 3, mitochondrial 276 490 IPR038538 -
Bach3g01342 563 Gene3D Transcription termination factor 3, mitochondrial 137 275 IPR038538 -
Bach3g01342 563 Pfam mTERF 172 480 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 MobiDBLite consensus disorder prediction 61 95 - -
Bach3g01342 563 PANTHER CGI-12 PROTEIN-RELATED 90 483 IPR003690 GO:0003690|GO:0006355
Bach3g01342 563 FunFam Transcription termination factor MTERF4, chloroplastic 274 488 - -
Bach3g01342 563 MobiDBLite consensus disorder prediction 499 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01342 Bach-Chr3 23116199 23117890 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach3g01342 mTERF 8.4e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01342 K15031 - qsa:O6P43_020032 800.816