Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01339 ATGAAGACCATTTTGTCTTCAGAATCTATGGACATCCCTGATGGGGTGAGCATCGAGGTGAATGCTAAAATCATCGAGGTGGAGGGTCCTCGCGGCAAGCTCGTTCGGGACTTCAAGCACCTGAACCTCGATTTTCAGCTCATCACTGATGAGGATGGCAAGAGAAAGCTGAAGATCGATGCCTGGTTTGGGTCCCGCAAGACATCTGCTGCTATCCGCACTGCTCTTAGTCATGTGGAGAATCTCATCACTGGTGTCACCAAGGGCTACCGCTACAAGATGCGTTTCGTCTATGCTCACTTTCCCATCAACGCTAGCATCACCAATGCGAACAAGTCTATTGAGATCAGGAACTTCCTTGGTGAAAAGAAGGTGAGGAAAGTGGATATGCTTGAAGGCGTTACTGTTTTGCGATCTGAGAAGGTCAAGGATGAATTAATATTGGATGGCAATGATATTGAGCTTGTTTCTCGGTCTTGCGCTCTCATTAACCAGAAATGCCATGTTAAGAACAAGGATATCCGGAAGTTCCTTGATGACAATCTTTTAGCCTCAATAGGGGAACATCCACTTCTGTTACATTCAGCTAGTGATAAGAGTTTGAGTGCCAATCCAATTAACGTGACCAAACACTTCTACTTCCCTGATTTTAGCCTCAAAAACAACCCTAGAATTATTCACGATGTTAAGCTCCTAGGCAGTGTCAAGTTACAGATACAAGACAGCAAGCAGGAAGAGACCAAAGCCATGCTCAATGATGCTTGTGAGAACTACAAGGCTTTGGTAATCGAGCTTGACACAAGAATGAACCCTGAATTTGGAGACCCAAATGACAAGCATATGGGCATTAATTTAGGCAGCATCGTATCCACAAAAATTATCAATGCTTCTGATGTTGGTTGTAATCCTCAAGGATGCTTCCATAGGGAACCATACCCAAATCCACAACATACTCTCTTGGAACTTCAACTCTACCAGTCAAGTTCCTTCACTTCCCTTCGACTGAAACTTTCCAGGGAAAGATCTTTCTTCAAAATGCTATTTCAGAGTTGCTACGTCAAACATCTTCCTAGAGGGAGAGAGTCACAAGCCAAGACGTCCCAACGAGCCACTTGCTTCTCATTTTCTGAAATTTCCTCTGCAACTCGGTCTTTCAGTGAGATAGAGTCACTGGGTGATGATTCTTGGGGCGTGTACTATGGAGGAAACCTTGCAAATGGCTGTCAAGTTGCAGTGAAAAGGTTCTCATCTCAGTTTTTAAGCTCACATTGGTCAGACAAGAGACCATTGTTGAAAGAAATCGTTGCTATCAGCAAGGTTCGCCATCCCAATTTGATTCCTATCAGAGGGTGGTGTCAAGACATACATGAAATATTGTTGGTCTATGACTTCTTTCCAATGGAAGCCTTGATAAATGGCTATTTGGATCTGGTGTTCTTCCATGGACTCAGCGATTCAAGATTATAA 1467 0.4369 MKTILSSESMDIPDGVSIEVNAKIIEVEGPRGKLVRDFKHLNLDFQLITDEDGKRKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNANKSIEIRNFLGEKKVRKVDMLEGVTVLRSEKVKDELILDGNDIELVSRSCALINQKCHVKNKDIRKFLDDNLLASIGEHPLLLHSASDKSLSANPINVTKHFYFPDFSLKNNPRIIHDVKLLGSVKLQIQDSKQEETKAMLNDACENYKALVIELDTRMNPEFGDPNDKHMGINLGSIVSTKIINASDVGCNPQGCFHREPYPNPQHTLLELQLYQSSSFTSLRLKLSRERSFFKMLFQSCYVKHLPRGRESQAKTSQRATCFSFSEISSATRSFSEIESLGDDSWGVYYGGNLANGCQVAVKRFSSQFLSSHWSDKRPLLKEIVAISKVRHPNLIPIRGWCQDIHEILLVYDFFPMEALINGYLDLVFFHGLSDSRL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01339 488 Gene3D - 232 312 - -
Bach3g01339 488 Gene3D Phosphorylase Kinase; domain 1 349 464 - -
Bach3g01339 488 SUPERFAMILY Ribosomal protein L6 1 89 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach3g01339 488 ProSiteProfiles Protein kinase domain profile. 385 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g01339 488 SUPERFAMILY Concanavalin A-like lectins/glucanases 261 301 IPR013320 -
Bach3g01339 488 SUPERFAMILY Protein kinase-like (PK-like) 366 470 IPR011009 -
Bach3g01339 488 Pfam Ribosomal protein L6 102 179 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach3g01339 488 Pfam Ribosomal protein L6 12 89 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach3g01339 488 FunFam 60S ribosomal protein L9 1 89 - -
Bach3g01339 488 FunFam 60S ribosomal protein L9 90 187 - -
Bach3g01339 488 Gene3D - 90 188 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach3g01339 488 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 180 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach3g01339 488 SUPERFAMILY Ribosomal protein L6 90 179 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach3g01339 488 Gene3D - 1 89 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach3g01339 488 Pfam Legume lectin domain 256 297 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01339 Bach-Chr3 23052297 23056356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01339 1 179 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 84.444 1.19e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bach3g01339 Lectin_legB 3.1e-06 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01339 K02940 - fve:101309878 343.199