Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01327 ATGGAAACTCTAAAAGCTGCGATTCCTCAGAGTTTGAAGCGAATGATTGGAGAGAACAGCACCGATGATCTTCGCAGTACATGCTCTTCTCTTCACGGTTTCTTTCAGCATTTCGAGCCGTTTCACCGAATCGTTAGTGACTTAGCGGATCCAGAAAAAGTACTCTGTGGTAAGAATAAGAACGCTGCACTAGAGTCCAAGCAGCTTGGGAATCAGTGCTTCTCGAACGGAGATTATAGCAAAGCTTTGGATTGCTATTCTCAGGCACTACGTATGGCTCCTTTGGAGGCTTGTGATGGGGACAAAAATCTGGTTGCAACATTATATATCAATCGAGCTGCTGTATTGCATAAAATGAATCTTTCAATAGAGTCTTTGCGAGATTGCACACGAGCTCTTCAGATATGTCCTAGCTATGCAAAGGCATGGTATAGGAGAGGTAAGGCGAATGCTTCACTAGAAAATTATAAAGATGCAATCTGCGACCTAAATGTGGCTAAGAGTGCAGAATCGTCATCTGGTGGGAAGAAACAAATAGAAAGTGAGATACAAAAAATTGTAGACCAGTGTGGAAAGATAAGTCCAGTGGTAAGCCATCATCAGAACACCTTGAATACTATGGGTGAGATGCCCCAAGTAAAGTTACAGTGTGTCACCATCCTTGATAAAGGAAGAGGTATGACATCTTCATGTGATATCTCCGAAGCATCTCTGGTTCTTATTGAAGAGCCTTATGCTATGATAATATTAAAGCAGTGCCGGGAAACCCATTGTCATTACTGCTTGAATGACCTACCTGTCGATAGAGTTCCTTGTAGTTCATGTTCAATACCACTATATTGCTCCCAGCAGTGCCAGACACGAGCAGGAGGACAAATGTTTAGGGTTTACCCAGAAGACCATTGCATTCTTAAAGGTCTACCCAGTGATCTTGGAGGATATGTTTCAGAAATTATTCTTGGCAAAATTTCAGACCAGGAAATGAAGGATATTCCTGAACACAAACATGAATGTCAAGGTATACAATGGTCTGCAGTATTGCCATCTGAGATAGTTTTGGCTGGTCGAATACTAGCAAAGTTTTTGCAGAGGAGTGGGTCAATGGACATTGTCAATTTTGTGGAAAGGCTGGAGTTTTCTCATTCTTATACACAAATGCCTTCTGAAAGCAAATTGGAATTGCATATCTATGCCATTGTCTTGTTATATTGTCTCAAACACTCCTATGGCGCTGCATTTTCTGTTGATGGAGTTTTTATCTCTCAGGTTGTCATAATTATTTCTCAAATTAGAGTGAATTGTATGACTATTGTTCAAATGAAATCAATAGATGCACATTGGCCACCAGATAAGTTTGGAGAATCTCGACCCAGCACTTACTTAACCAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGCAGTTTGTTCAATCATTCTTGCCAGCCAAATGTTTATGCATATTTCCTTTCGCGTACTCTTTGTATAAGAACAACAAGAGTTGTAGCAGCTGGGTGTGAGCTGGAGTTGTCTTATGGTCCACAGGTTGGGCTGTGGGATTGTAAGGATCGCCTTAATTTTCTGAAAGATGAGTACGCATTTCAATGTCAATGTAGTGGTTGTTCAGAAGTCAATCTATCTGACATTGTGCTTAATGCTTTTCACTGTGTCAATCCAAATTGTCCTGGCGCAGTATTGGAGAGCAGAATAGTTGACTGTGAAAAGCAGAAAATAAGGCACTTATCTAGTGCTGACAAAGTTTCCAAGAATGACGAAATCAACGAAGTTTGTTCCCATGCATTCAACCAAAATGAATCCAATCATGTTCAACCTGAATGCTGTTTAAAATGTGGTTCTTACTGTAATTTAGATTCTTCTCGTACTACAGTTGATAAAGCTTGGAAATGCATCAAAAGATTGCAGAATGCAATAATGTCAAAAGAAATTTCCACTACTACGATGTCAGATGCTTTGAGATCCCTTCATTTGCTAAGATCAAAACTGCATGCATACAACAGGCACATTGCAGAGGCAGAGGACAATCTTGCCCAGGCATTTAGTTTGGTGGGAGAATTACAATTAGCAATGGACCATTGTAAAGCATCTATCCAGATTCTGGAGAAGCTATATGACCCTGATGACATTGTCATTGCCTATGAACTTGTGAAGCTTTGTTCCATTCAGCTTTCTTTGGGTGATTGTACAGCTGCGGACAGCATAACTCGAATAAGTGATATCTTCTTACGTTACTATGGACCTCATGCAAACTTAATATTCCCGCATCTTCAAGATCTTGGGAGAGAAATCAAGAATTTTTAA 2331 0.4015 METLKAAIPQSLKRMIGENSTDDLRSTCSSLHGFFQHFEPFHRIVSDLADPEKVLCGKNKNAALESKQLGNQCFSNGDYSKALDCYSQALRMAPLEACDGDKNLVATLYINRAAVLHKMNLSIESLRDCTRALQICPSYAKAWYRRGKANASLENYKDAICDLNVAKSAESSSGGKKQIESEIQKIVDQCGKISPVVSHHQNTLNTMGEMPQVKLQCVTILDKGRGMTSSCDISEASLVLIEEPYAMIILKQCRETHCHYCLNDLPVDRVPCSSCSIPLYCSQQCQTRAGGQMFRVYPEDHCILKGLPSDLGGYVSEIILGKISDQEMKDIPEHKHECQGIQWSAVLPSEIVLAGRILAKFLQRSGSMDIVNFVERLEFSHSYTQMPSESKLELHIYAIVLLYCLKHSYGAAFSVDGVFISQVVIIISQIRVNCMTIVQMKSIDAHWPPDKFGESRPSTYLTSNVEQVRVGKAIYKAGSLFNHSCQPNVYAYFLSRTLCIRTTRVVAAGCELELSYGPQVGLWDCKDRLNFLKDEYAFQCQCSGCSEVNLSDIVLNAFHCVNPNCPGAVLESRIVDCEKQKIRHLSSADKVSKNDEINEVCSHAFNQNESNHVQPECCLKCGSYCNLDSSRTTVDKAWKCIKRLQNAIMSKEISTTTMSDALRSLHLLRSKLHAYNRHIAEAEDNLAQAFSLVGELQLAMDHCKASIQILEKLYDPDDIVIAYELVKLCSIQLSLGDCTAADSITRISDIFLRYYGPHANLIFPHLQDLGREIKNF 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01327 776 Gene3D Tetratricopeptide repeat domain 38 195 IPR011990 GO:0005515
Bach3g01327 776 ProSiteProfiles SET domain profile. 213 517 IPR001214 GO:0005515
Bach3g01327 776 SMART tpr_5 106 139 IPR019734 GO:0005515
Bach3g01327 776 SMART tpr_5 680 713 IPR019734 GO:0005515
Bach3g01327 776 SMART tpr_5 140 173 IPR019734 GO:0005515
Bach3g01327 776 SMART tpr_5 63 96 IPR019734 GO:0005515
Bach3g01327 776 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Bach3g01327 776 Gene3D SET domain 421 516 IPR046341 -
Bach3g01327 776 Pfam SET domain 462 517 IPR001214 GO:0005515
Bach3g01327 776 Coils Coil 665 685 - -
Bach3g01327 776 Gene3D Tetratricopeptide repeat domain 522 773 IPR011990 GO:0005515
Bach3g01327 776 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 773 - -
Bach3g01327 776 SUPERFAMILY SET domain 195 547 IPR046341 -
Bach3g01327 776 SUPERFAMILY TPR-like 63 712 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01327 Bach-Chr3 22969588 22976400 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bach3g01327 SET 3.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01327 K24634 - pcin:129294093 1113.98