Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01312 CTTTTTCGAAGGTGTTCGATGGAGAAAGAGTTGGTCAAATTGTACGAATCCGTGAAGAAGGCGGCGGACGCTGCGAGCTCCGGCGAGAGCGAACATGAAGAAAGTCGATGCATTGATGCGCTCGAGCAGCTTAAGAAATTCCCAGTGAATTATCAAATTCTCGTTTCCACCCAGGTGGGCAAACGTCTTCGACATCTCACAAAACATCCAAATAAGAAAATTCGGGCATTTTCTGCTGACTTGATTGAGATATGGAAAGGCATAATTATCAAGGAAACCAGCAAGAACAAGAATGGCAGCTCAAATAATCATGTTGAGTCAGCAAATGCGGAGACAGCTAAAGCTGAGAAGGTTCAGAAGACACCTCAGGTGAAGGTTGAGAAGGCTTCAAAAGTTGAAACCGTCAAGGTTGAGAAAATTGATAGGAATGGTACATCAAACTTAGCAAATTCAAAGTTGCAAAATGTGAATGTCAAAAGTGAGGAAGCTGATTCTGTGGCACATGTTAAGGTGGAAAAGATAGCCAGGGACGAGAAGCAAGTTTCTGGAGTGAAGAAACCATCATCCAGCCCTGCTGCTTCTGCTCCTCCAAAGCTGAAATCTATGATTAAATCTAATGATGCAATGCGTGACAAAATAAGAGAAATGCTCCATGATGCTTTCTCCCGGGTTGTTGGAGAGGCTGATGAAGAAGTCATGGATCAAGTTAATGCATGTGATCCTATTCGAGTTGCAGTTACTGTGGAGTCTGTACTGTTTGAAAAGTGGGGTCCTTCTAATGGGGCTCAGAAGGTTAAGTATAGGTCCTTAATGTTTAATCTTAAGGATCAAAATAACCAAGATTTCCGGAGAAAAGTTCTTTTGGGAGATGTTGAGCCAGAGCGGCTGCTCAACATGACCACAGAAGAAATGGCTAGTGACAGAAGGAAGAAGGAGAATGAGCAAATAAAACAGAAAGCTTTATTTGATTGTGAGCGTGGAGCGCAACCAAAAGCCACAACCGATCAATTTAAATGTGGCCGATGTGGTCAAAGGAAGACCACCTATTACCAAATGCAGACTCGCAGTGCTGATGAACCTATGACAACCTATGTTACATGCGTAGTCTGTAACAACCGTTGGAAGTTCTGTTAG 1134 0.4303 MEKELVKLYESVKKAADAASSGESEHEESRCIDALEQLKKFPVNYQILVSTQVGKRLRHLTKHPNKKIRAFSADLIEIWKGIIIKETSKNKNGSSNNHVESANAETAKAEKVQKTPQVKVEKASKVETVKVEKIDRNGTSNLANSKLQNVNVKSEEADSVAHVKVEKIARDEKQVSGVKKPSSSPAASAPPKLKSMIKSNDAMRDKIREMLHDAFSRVVGEADEEVMDQVNACDPIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDQNNQDFRRKVLLGDVEPERLLNMTTEEMASDRRKKENEQIKQKALFDCERGAQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVVCNNRWKFC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01312 371 MobiDBLite consensus disorder prediction 89 103 - -
Bach3g01312 371 Pfam Transcription factor S-II (TFIIS) 331 369 IPR001222 GO:0003676|GO:0006351|GO:0008270
Bach3g01312 371 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1 99 IPR035441 -
Bach3g01312 371 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 13 371 - -
Bach3g01312 371 MobiDBLite consensus disorder prediction 104 119 - -
Bach3g01312 371 Gene3D - 300 371 - -
Bach3g01312 371 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 4 97 IPR035441 -
Bach3g01312 371 Pfam TFIIS helical bundle-like domain 34 83 IPR017923 -
Bach3g01312 371 ProSitePatterns Zinc finger TFIIS-type signature. 333 368 IPR001222 GO:0003676|GO:0006351|GO:0008270
Bach3g01312 371 Gene3D - 183 299 IPR036575 GO:0006351
Bach3g01312 371 ProSiteProfiles TFIIS central domain profile. 203 326 IPR003618 GO:0006351
Bach3g01312 371 MobiDBLite consensus disorder prediction 172 198 - -
Bach3g01312 371 FunFam Probable Transcription elongation factor S-II 300 371 - -
Bach3g01312 371 CDD TFIIS_I 9 83 - -
Bach3g01312 371 ProSiteProfiles Zinc finger TFIIS-type profile. 329 369 IPR001222 GO:0003676|GO:0006351|GO:0008270
Bach3g01312 371 SMART mid_6 201 309 IPR003618 GO:0006351
Bach3g01312 371 SMART Cys4_2 331 370 IPR001222 GO:0003676|GO:0006351|GO:0008270
Bach3g01312 371 ProSiteProfiles TFIIS N-terminal domain profile. 10 86 IPR017923 -
Bach3g01312 371 SUPERFAMILY Elongation factor TFIIS domain 2 185 301 IPR036575 GO:0006351
Bach3g01312 371 NCBIfam transcription elongation factor S-II 14 371 IPR006289 GO:0003676|GO:0005634|GO:0006368
Bach3g01312 371 MobiDBLite consensus disorder prediction 89 119 - -
Bach3g01312 371 PIRSF TFIIS 2 371 IPR035100 -
Bach3g01312 371 SUPERFAMILY Zinc beta-ribbon 309 369 - -
Bach3g01312 371 CDD Zn-ribbon_TFIIS 324 370 - -
Bach3g01312 371 SMART TFS2_5 8 85 IPR003617 GO:0005634
Bach3g01312 371 Pfam Transcription factor S-II (TFIIS), central domain 200 317 IPR003618 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01312 Bach-Chr3 22851817 22853950 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bach3g01312 TFIIS_M 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01312 K03145 - qsa:O6P43_014856 532.332