Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01310 CAAGCCCAAGCTGGTACCCTATTTGTAAACCAGAGAGAAAAACTTTCTAAGAAAAAGTAAAAGAAAAACCCAAACAAGAAGAAATCCCATCATAGATCTTAAGCTGTGGCACCGGCAACCACGGCATTCAGTGGAAAATGGATATCCCTGACCTTGAAAGACTGATGACGGTCAAAAGAGTGATCAGAGAGCTTGTTCAAGGTCAAGAGTCTGCAGCGCAGCTCAAGGTTCTTCTTCAGGAGCATTCTGGGGTTGATGGGTCGCTCTCAGCTAAGGAGCTTGTGGCCAAAATACAGAGATCTTTCATTGAGAGTCTTTCTGTACTGACTTCTTCTGAGGCCGCCAACGGTGGTGAAGTTTCCCAGAATCTGGCTATTTCTGGGGAGACCGGTTCACAGCAAGCAGCTTCCTGGAATGATCGTGGCTTTGAAGATTCCGGTGAGAGTAGGAAGAGATCGTCGCCGGTGCCAACAAAGGATCGGAGGGGTTGCTACAAACGAAGAAAGAATGCTCAGGCATGGACCAAAGTCTCCTCCAAACCTGATGATAATTATGCATGGAGGAAGTACGGACAGAAGGAAATCCTCAATTCTAAATTCCCCAGGAGTTACTTCAGGTGCACTCGCAAGTATGATCAAGGTTGCCGGGCAATCAAACAAGTGCAGCGGATACAAGAGAGTCCAGAAATGTACCAGACAACGTACATTGGAAACCATACATGCAGAAACATGGTCAAGATGCCGCAACTAGTCATAGATTCTACAGCTTCCTGGGAATCATTTCTGGTGAATCAACCTGAGCCAGACCCATCAAAGGTAAATGAACAGGAGCACCCTTTCAGCTCATCAATAATAAAAGAGGAATACCCCAAAGAAGAAACAAGTCCAATAATAAAAGAGGAATATCCAAAAGAAGAAAGACTGAGTGATGTTACAGACAACTTGGAAACTAGCCTATGGTCGGATTTGAAGGATTTTGAACCAGCAGTGGTGCTTTCAACAAAGATGGCTTCAGATACTGCAGATACTGTATATTCATGCACAGGTTCTCACAGTACTCTGGAAATGGATTTTGGAGAGGATTCTGTTTTTGGCAGTGATCGTGATTTCCACTTTGTTGATAACCGCTTATTAAATTAG 1139 0.4425 MDIPDLERLMTVKRVIRELVQGQESAAQLKVLLQEHSGVDGSLSAKELVAKIQRSFIESLSVLTSSEAANGGEVSQNLAISGETGSQQAASWNDRGFEDSGESRKRSSPVPTKDRRGCYKRRKNAQAWTKVSSKPDDNYAWRKYGQKEILNSKFPRSYFRCTRKYDQGCRAIKQVQRIQESPEMYQTTYIGNHTCRNMVKMPQLVIDSTASWESFLVNQPEPDPSKVNEQEHPFSSSIIKEEYPKEETSPIIKEEYPKEERLSDVTDNLETSLWSDLKDFEPAVVLSTKMASDTADTVYSCTGSHSTLEMDFGEDSVFGSDRDFHFVDNRLLN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01310 333 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g01310 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 228 IPR044810 GO:0003700
Bach3g01310 333 SUPERFAMILY WRKY DNA-binding domain 134 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g01310 333 Gene3D WRKY domain 121 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g01310 333 MobiDBLite consensus disorder prediction 97 115 - -
Bach3g01310 333 ProSiteProfiles WRKY domain profile. 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g01310 333 MobiDBLite consensus disorder prediction 82 117 - -
Bach3g01310 333 Pfam WRKY DNA -binding domain 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01310 Bach-Chr3 22835907 22837870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01310 14 203 WRKY Transcription Factor Family AT3G56400 48.168 1.29e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach3g01310 WRKY 1.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01310 - - gmx:100170683 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01310 3 22835907 22837870 Bach3g01310 3 22835907 22837870 ECH