Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01307 ATGGCTTCTGGGTCTGCAGCTTCTTCTTCTTCTTCTTCAAATTGGGTCATGGAAAACGGGGATGTCCCTCATGTTTTGGCTGTTGATGACAACCTTATTGATCGCAAACTTGTTGAGAAACTACTCAGGAAGTCTTCTTGCAGAGTGACAACTGCAGAAAATGGGCCACGGGCATTAGAGTTTTTGGGCTTAGCTAGTGATAAACAAAACAACTTGGGCAGTGTAAGAGGTTCCAAAGTAAATTTGGTTATCACAGATTACTGCATGCCAGGGATGACAGGCTATGAGCTGCTTAAGAAAATAAAGGAATCAGCTATCACGAAGGAGGTTCCAGTTGTGATTATGTCATCAGAGAACATCCCAACTCGTGTTAACGAGTGTTTGGAGAAAGGAGCTCAGATGTTTATTCAGAAACCCCTCAAACAATCTGATGTAAATAAACTGACATTGTACTGTGCAGACTGCGATTCTGGTTCCGAAGAGTCAGCAATGGCGGCTGTGTTGGAGCCGTCAATCACGAGCCCAGTGTTCGCATCAAAGTATCACTCTTCTCATCCGTCTCACAATCATCTGAGATTTCACAGTTTCACCTTAAAACCCAAGTTTCTCACTCTTCGCAACCCCGCTGATACCAATATTCCTAATTGTGCTGGAAATGATTCTCCTTCTTCGTCACCACGGCCTGAAGGAATTTATCTTGACTCAGAATTCGATCCAAACACGACTCCGGACCGCCGCAGAACCGTTAGACTGGCCTGGGAGAAGTTAGTCCGTTGGTCCAGGTCTTGGCGCTCCAAGGCCAAGACTGACATACTCGAACGCACTAACAAGGTGGTTGTGCTTGGCGGTGGATCATTTGGGACGGCAATGGCTGCCCATGTTGCAAGTAGAAAGGCTCAATTGAAAGTTATGATGCTTCTGCGTGACCCTGAAGTTTGCCTGTCTATCAATGAGAGGCACTGCAATTGTAACTACTTCCCAGAATACAAGTTGCCCGAAAATGTAGTTGCGACAACTGATGCAAAAGCTGCTTTTCTTGGTGCGGACTATTGCCTTCATGCAGTGCCTGTCCAGTTCAGCTCGTCTTTTCTTGAGGGTGTCGCAGATTATGTTGATCCAGGGTTGCCATTCATATCTCTAAGCAAAGGCCTAGAGCTGAATACACTGAGGATGATGTCTCAAATTATTCCTCAAGCGTTAGGGAATCCTCGCCAACCTTTTGTTGCATTATCAGGGCCCTCTTTTGCTCTTGAATTGATGAACAAGTTACCCACAGCAATGGTGGTGGCATCAAAAGATAAAAACTTGGCAAATTTAGTTCAGCAGCTATTAGCTTCCAGTCATCTAAGAATCAGCACATCAAGTGACGTTACAGGAGTTGAAATCACAGGTGCACTCAAGAATGTGCTTGCCATAGCTGCTGGGATGGTGGAAGGTATGGATCTTGGTAACAACTCAATGGCTGCTCTTGTAGCTCAAGGCTGTTCAGAGATTCGGTGGCTTGCAACAAAGATGGGTGCGAAGCCAACTACAATAACTGGTCTAGCAGGAACTGGAGATATAATGCTTACATGCTTTGTGAATCTTTCAAGAAACAGAACGGTTGGAATACGTCTTGGATCTGGCGAGAATCTTGAGGACATACTTAACTCCATGAATCAGGTAGCTGAAGGTGTTTCTACGGCTGGAGCTGTGATTGCTTTGGCACAGAAGTATAATGTAAAGATGCCAGTTTTAACTGCAGTTGCTCGTATTATTGACAATGAACTCACCCCTAAGAAAGCTGTTTTTGAGTTGATGAGCCTCCCTCAGAAAGATGATCAGAATTCAGATAATGTTAACACAGCTGATGAGAATCCAAATAACAATGACACAGCTGATCGGAGTCCTCTTACTAGTTCTAATACAAATGATTTGCAGGCTTCCAAATCCAATCACTCATGGGAACATGTCTTAGCTGGTAACTAA 1968 0.4441 MASGSAASSSSSSNWVMENGDVPHVLAVDDNLIDRKLVEKLLRKSSCRVTTAENGPRALEFLGLASDKQNNLGSVRGSKVNLVITDYCMPGMTGYELLKKIKESAITKEVPVVIMSSENIPTRVNECLEKGAQMFIQKPLKQSDVNKLTLYCADCDSGSEESAMAAVLEPSITSPVFASKYHSSHPSHNHLRFHSFTLKPKFLTLRNPADTNIPNCAGNDSPSSSPRPEGIYLDSEFDPNTTPDRRRTVRLAWEKLVRWSRSWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVASRKAQLKVMMLLRDPEVCLSINERHCNCNYFPEYKLPENVVATTDAKAAFLGADYCLHAVPVQFSSSFLEGVADYVDPGLPFISLSKGLELNTLRMMSQIIPQALGNPRQPFVALSGPSFALELMNKLPTAMVVASKDKNLANLVQQLLASSHLRISTSSDVTGVEITGALKNVLAIAAGMVEGMDLGNNSMAALVAQGCSEIRWLATKMGAKPTTITGLAGTGDIMLTCFVNLSRNRTVGIRLGSGENLEDILNSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKKAVFELMSLPQKDDQNSDNVNTADENPNNNDTADRSPLTSSNTNDLQASKSNHSWEHVLAGN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01307 655 Hamap Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 276 598 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 409 429 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 474 498 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 280 297 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 332 359 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 449 473 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 514 531 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 FunFam Glycerol-3-phosphate dehydrogenase [NAD(P)+] 268 463 - -
Bach3g01307 655 FunFam Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 465 605 - -
Bach3g01307 655 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 277 436 IPR011128 GO:0016616|GO:0046168|GO:0051287
Bach3g01307 655 Gene3D - 262 463 - -
Bach3g01307 655 MobiDBLite consensus disorder prediction 213 239 - -
Bach3g01307 655 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 275 456 IPR036291 -
Bach3g01307 655 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 274 606 - -
Bach3g01307 655 Pfam Response regulator receiver domain 25 146 IPR001789 GO:0000160
Bach3g01307 655 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 455 607 IPR008927 -
Bach3g01307 655 CDD REC_typeA_ARR 25 148 - -
Bach3g01307 655 SMART REC_2 23 149 IPR001789 GO:0000160
Bach3g01307 655 MobiDBLite consensus disorder prediction 213 228 - -
Bach3g01307 655 Gene3D - 465 610 IPR013328 GO:0016491
Bach3g01307 655 MobiDBLite consensus disorder prediction 603 649 - -
Bach3g01307 655 SUPERFAMILY CheY-like 23 145 IPR011006 -
Bach3g01307 655 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 456 596 IPR006109 GO:0005975|GO:0047952
Bach3g01307 655 MobiDBLite consensus disorder prediction 602 655 - -
Bach3g01307 655 ProSitePatterns NAD-dependent glycerol-3-phosphate dehydrogenase signature. 464 485 IPR006168 GO:0006072|GO:0009331|GO:0047952
Bach3g01307 655 Gene3D - 24 170 - -
Bach3g01307 655 ProSiteProfiles Response regulatory domain profile. 24 153 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01307 Bach-Chr3 22811287 22821751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01307 240 607 Acyl Lipid Metabolism Gene Families AT2G40690 85.598 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach3g01307 NAD_Gly3P_dh_N 3.9e-40 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01307 K00006 - qsa:O6P43_014851 696.812