Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01305 ATGCGAGCATTGTTGAACATGAGAACTCTTGCCTGCTTGTTCTTGTTGCTTCTTATAGTCCCAGTGTTCGTCAAATCTGTCAATCCGTCCCTCAACGACGACGTTCTTGGGCTGATTGTGTTCAAAGCTGATATACAAGATCCGAAAGGGAAACTGTTATCTTGGAACGAAGACGATGAAACTCCCTGTTCCTGGGACGGTGTGAAATGCAGCTCCAGATCCAACAGGGTCATTGAACTTAACCTCGACGGGTTCTCTCTTTCGGGTCGGATAGGTCGAGGTCTCCTCCAGTTGCAGTATCTAAGAAAGCTTTCTCTCGCCAAGAACAATCTCACTGGAGGAATAAGTCCTAACATTGCTCTTATTGATAACCTTCGAGCAATTGACTTGAGTGAGAACAATCTCTCAGGAGAGGTGCCCGACGAATTTTTCCGACAATGCGGGTCTCTGAGAACAGTTTCTTTGGCGAGGAACAAGTTTTCTGAGAAGATTCCGTCTAGTTTGAGCTCGTGCTCAGCTCTTGCTGCGATTGACTTGTCGTTTAATCAGTTTTCAGGCTCTCTTCCTTCTGGAATTTGGACTTTGAGTGGACTGAGGTCGTTGGATTTGTCTGATAATTCGTTGGAGGGCGAGATTCCAAAGGAAATTGAAGGATTGAAGAATTTACGAGCAATTAACTTGGCCAAAAATATGTTTTCTGGCAAGGTCCCAAATGGGATTAGAAGTTGCTTGCTTTTGAGGTCTATTGATCTCAGCGAGAATTCTCTTTCTGGGAACTTTCCAGATTTCCGGGAGCTTACCTTGTGTAATTACCTTAGTTTGCGTGGAAACTCTTTTTCAGGCGAGGTTCCTGCGTGGATTGGGGAAATGAAAAGCCTTGAGACGCTGGACCTCTCTCTGAACAGATTTTCTGGTAAGGTGCCAAATTCTCTTGGAAATCTTCAGTCTTTGAAGACAATGAATTTTTCCGGAAATGGCTTCGTTGGGAATCTGCCAGAGTCTATGATGAATTGCACAAGCCTTTTGGCTTTAGACTTCAGCCAGAATTCACTGTCCGGTGATCTTCCATCGTGGGTTTTCAAGTCAGATTTACAGAAAGTTTTGGTCTCAGAAAGCAAATTGACTGCTAGCCTGAAAAACCCTTTAAATTCCTTGGCGGAAGTTACGGTTCAAAATCTTCAATTCTTGGATTTATCTGAAAATAGATTTTCTGGCGAAATCCCATCCTCTATTGCAGTTTTAAGCAGCTTGCAATTCTTGGATTTATCAAAGAACTCTCTACAGGGTCCTATACCAGTTGCAATTGAAGAATTGAAGTCGCTTTACAGTCTTGATTTGAGTGGGAATAAGCTGAATGGAAGCATACCTTTGGAGATAGGAGGAGCAGTGTCTTTGAAGGAACTGAGATTGGAAAAGAACTTCCTAGTCGGGAAAATTCCGACCACAATTGGGAACTGCTCTTCATTATCGACTCTGAATCTATCACAAAACAGACTAACTGGCTCAATACCTGCAGCATTTGCAAAGCTTACTAACCTACAAGTTGTGGACTTATCTTTTAACAACCTTACTGGAACCCTTCCCAAGCAATTGGCCAATCTCCCTAACCTTCTTTCTTTCAATTTATCTCACAACAACCTCCAGGGTGAACTGCCTGCTGGTGGCTTTTTCAACACTATTTCGCCTTCCTCCGTTTCTGGCAACCCATCTCTTTGTGGTTCTGCAGTCAATAAATCATGCCCCACTGTCCTTCCAAAGCCTATTGTCTTAAATCCCAACACTTCTACTGATTATACATCAGGCTCACTATCTCCGAATGTTGTTGTTCACAAGAGAATCATTCTCAGCATTTCTGCACTCATTGCCATTGGTGCAGCGGCTGTCATTGTGATTGGAGTCATTGCCATCACTGTTCTCAATCTTCGTGTTCGGTCTGCCACATCTCGATTTGCAGCTGTGCTCACATTATCTGCAGGGGATGAATTCAGCCATTCCCCAACTACTGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAACCTGACTTCAGCACTGGAGCACATGCTTTGCTTAATAAAGATTGTGAGCTTGGGCGAGGTGGTTTTGGAGCAGTGTATCGAACAGTTCTTAGAGATGGGCGCTCAGTTGCAATCAAGAAGCTCACTGTCTCAAGTCTTGTCAAGTCCCAGGAAGATTTTGAAAGAGAAGTCAAGAACTTAGGAAAAGTCCATCACCAAAATCTTGTGGCACTTGAAGGGAAGAGGCCTGTTGAATACATGGAAGATGATGTGGTGGTGCTTTGTGACATGGTCAGAGCAGCTTTGGATGAAGGCAGGGTGGAGGAATGTATTGATGGGAGGTTGCAGGGCAAGTTCCCGGCCGAGGAAGCAATTCCAGTTATGAAGCTAGGTTTGATATGTACTTCTCAAGTTCCATCCAATCGGCCAGACATGGGAGAGGTAGTTAACATATTGGAACTCATAAGATGCCCTTCGGAAGGACAAGAGGAGTTGGTATGA 2523 0.4411 MRALLNMRTLACLFLLLLIVPVFVKSVNPSLNDDVLGLIVFKADIQDPKGKLLSWNEDDETPCSWDGVKCSSRSNRVIELNLDGFSLSGRIGRGLLQLQYLRKLSLAKNNLTGGISPNIALIDNLRAIDLSENNLSGEVPDEFFRQCGSLRTVSLARNKFSEKIPSSLSSCSALAAIDLSFNQFSGSLPSGIWTLSGLRSLDLSDNSLEGEIPKEIEGLKNLRAINLAKNMFSGKVPNGIRSCLLLRSIDLSENSLSGNFPDFRELTLCNYLSLRGNSFSGEVPAWIGEMKSLETLDLSLNRFSGKVPNSLGNLQSLKTMNFSGNGFVGNLPESMMNCTSLLALDFSQNSLSGDLPSWVFKSDLQKVLVSESKLTASLKNPLNSLAEVTVQNLQFLDLSENRFSGEIPSSIAVLSSLQFLDLSKNSLQGPIPVAIEELKSLYSLDLSGNKLNGSIPLEIGGAVSLKELRLEKNFLVGKIPTTIGNCSSLSTLNLSQNRLTGSIPAAFAKLTNLQVVDLSFNNLTGTLPKQLANLPNLLSFNLSHNNLQGELPAGGFFNTISPSSVSGNPSLCGSAVNKSCPTVLPKPIVLNPNTSTDYTSGSLSPNVVVHKRIILSISALIAIGAAAVIVIGVIAITVLNLRVRSATSRFAAVLTLSAGDEFSHSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYRTVLRDGRSVAIKKLTVSSLVKSQEDFEREVKNLGKVHHQNLVALEGKRPVEYMEDDVVVLCDMVRAALDEGRVEECIDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELV 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01305 840 ProSiteProfiles Protein kinase domain profile. 692 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g01305 840 PRINTS Leucine-rich repeat signature 198 211 - -
Bach3g01305 840 PRINTS Leucine-rich repeat signature 414 427 - -
Bach3g01305 840 Pfam Protein kinase domain 695 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g01305 840 SUPERFAMILY L domain-like 246 594 - -
Bach3g01305 840 Pfam Leucine rich repeat 464 523 IPR001611 GO:0005515
Bach3g01305 840 Pfam Leucine rich repeat 392 451 IPR001611 GO:0005515
Bach3g01305 840 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Bach3g01305 840 SUPERFAMILY L domain-like 31 262 - -
Bach3g01305 840 SMART LRR_typ_2 290 313 IPR003591 -
Bach3g01305 840 SMART LRR_typ_2 390 414 IPR003591 -
Bach3g01305 840 SMART LRR_typ_2 534 558 IPR003591 -
Bach3g01305 840 SMART LRR_typ_2 438 462 IPR003591 -
Bach3g01305 840 SMART LRR_typ_2 486 509 IPR003591 -
Bach3g01305 840 SMART LRR_typ_2 510 533 IPR003591 -
Bach3g01305 840 SMART LRR_typ_2 195 219 IPR003591 -
Bach3g01305 840 SMART LRR_typ_2 122 146 IPR003591 -
Bach3g01305 840 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Bach3g01305 840 SMART tyrkin_6 692 826 IPR020635 GO:0004713|GO:0006468
Bach3g01305 840 Gene3D Ribonuclease Inhibitor 308 584 IPR032675 -
Bach3g01305 840 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 686 759 - -
Bach3g01305 840 Gene3D Transferase(Phosphotransferase) domain 1 754 831 - -
Bach3g01305 840 Gene3D Ribonuclease Inhibitor 32 307 IPR032675 -
Bach3g01305 840 SUPERFAMILY Protein kinase-like (PK-like) 695 755 IPR011009 -
Bach3g01305 840 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Bach3g01305 840 Pfam Leucine Rich Repeat 198 219 IPR001611 GO:0005515
Bach3g01305 840 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 390 754 - -
Bach3g01305 840 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bach3g01305 840 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 310 584 - -
Bach3g01305 840 Gene3D Phosphorylase Kinase; domain 1 685 753 - -
Bach3g01305 840 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 32 309 - -
Bach3g01305 840 SMART LRR_sd22_2 414 440 - -
Bach3g01305 840 SMART LRR_sd22_2 195 221 - -
Bach3g01305 840 SMART LRR_sd22_2 510 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01305 Bach-Chr3 22792310 22795909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01305 749 839 Receptor kinase-like Gene Family AT3G56370 73.626 2.61e-37 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bach3g01305 Pkinase 7.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01305 - - qsa:O6P43_014848 1086.25