Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01300 ATGGCCGTTGCAGCATTCTCAGCTATCTCTCTTCTTTTCTTTCTTCTTAACCTTGAAGGCACTTATGGAGACGGATGGCAAACTGGGCATGCCACATTTTATGGTGGCGGAGATGCATCGGGCACAATGGGGGGAGCTTGTGGGTATGGCAACTTGTACAGCCAAGGTTATGGGACTAACACTGCCGCACTCAGTACTGCTCTATTCAACAATGGCTTGAGCTGCGGGTCCTGCTACGAGATGCAATGTGACAAAAACAGGGACTCCAGATGGTGCCTCCCTGGTTCCATTATTGTTACTGCCACAAACTTCTGCCCCCCTAACTATGCCTTATCCAATGACAATGGTGGCTGGTGCAACCCTCCTCTGCAGCACTTTGATCTAGCTGAGCCTGCTTTCTTGCAAATTGGTCAATACAAAGCTGGAATTGTTCCCATTTCCTTCAGAAGAGTCCCTTGTGTAAAGAAAGGAGGAATCAGATTCACCATAAATGGTCACTCTTACTTCAACTTGGTTTTGATCACAAACGTTGGTGGAGCTGGAGATGTCCACTCTGTGTCAATCAAGGGGTCCAACACTGGGTGGCAGCAAATGTCAAGGAACTGGGGCCAGAACTGGCAGAGCAATTCCTACCTCAATGGCCAGAGCCTCTCCTTCCAAGTTACAACCAGCGATGGCAGAACTGTCACTAGCTACAATGTTGCACCTTCCAATTGGCAATTTGGTCAGACGTACACGGGGGTACAGTTGTAG 753 0.4874 MAVAAFSAISLLFFLLNLEGTYGDGWQTGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMQCDKNRDSRWCLPGSIIVTATNFCPPNYALSNDNGGWCNPPLQHFDLAEPAFLQIGQYKAGIVPISFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSNTGWQQMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSYNVAPSNWQFGQTYTGVQL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01300 250 Gene3D - 157 250 IPR036749 -
Bach3g01300 250 PRINTS Expansin signature 204 225 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 116 133 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 157 169 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 85 96 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 133 146 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 233 249 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 97 107 IPR002963 GO:0009664
Bach3g01300 250 PRINTS Expansin signature 169 190 IPR002963 GO:0009664
Bach3g01300 250 PANTHER EXPANSIN-A15 9 247 IPR002963 GO:0009664
Bach3g01300 250 Gene3D - 16 153 IPR036908 -
Bach3g01300 250 FunFam Expansin 158 250 - -
Bach3g01300 250 SUPERFAMILY Barwin-like endoglucanases 25 176 IPR036908 -
Bach3g01300 250 SUPERFAMILY PHL pollen allergen 155 247 IPR036749 -
Bach3g01300 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 168 247 IPR007117 -
Bach3g01300 250 SMART dpbb_1 61 148 IPR007112 -
Bach3g01300 250 Pfam Expansin C-terminal domain 159 236 IPR007117 -
Bach3g01300 250 Pfam Lytic transglycolase 61 147 IPR009009 -
Bach3g01300 250 CDD DPBB_EXPA_N 25 153 - -
Bach3g01300 250 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bach3g01300 250 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Bach3g01300 250 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Bach3g01300 250 PRINTS Expansin/Lol pI family signature 195 209 IPR007118 GO:0005576
Bach3g01300 250 PRINTS Expansin/Lol pI family signature 141 157 IPR007118 GO:0005576
Bach3g01300 250 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Bach3g01300 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 158 IPR007112 -
Bach3g01300 250 FunFam Expansin 16 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01300 Bach-Chr3 22755088 22756151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01300 1 250 Expansin Gene Family AT2G40610 79.842 7.88e-145 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01300 K20628 - zju:107414006 451.44