Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01286 ATGAGTGCTGTTAGTAACATCTACTTCTCTTCACAGTTCACAACTCCTCTCGAGATTGATGTGCTTTCGAAGCAGTCAAAGAAGAAATCGACATGCCATTTCGTGGTTCCGATTCAGAACAACTCTGTTAGGTTGACTGGAATCCGTTGTAAACTTTCAGATAGTGGAATTGAAGAGAACCCTGCAAGCAAGAGGGCCATTAATTCCAGAAATAGAATGGAAGAGTACAACACAGCTATGAGGAGGAGGATGAGGAACCCATATGAATACCACCACGAACTAGGTATGAATTACACACTTATAACTGACGATTTGATTGTGGGCTCCCAACCACAGAAACCTGAAGACATAGATCACCTTAAAAAGGAAGAGGGTGTAGCTTACATTCTAAACTTGCAACAGGATAAAGATGTGGAATATTGGGGAATAGACTTACAGTCAATAATAACAAGATGTCATGAGCTTGGCATCCGTCACATGAGGAGGCCTGCAAAAGACTTCGATCCAAACTCCTTGCGAAATGAACTACCAAAGGCAGTTTCATCATTGGAATGGGCCATTTCCGAGGGAAAAGGAAGAGTTTATGTGCATTGCACAGCTGGACTTGGAAGAGCTCCTGCAGTGGCAATTGCTTATTTGTTCTGGCTTTGTGGCATGAACCTAAATTCAGCATATGATATGCTAACTTCAAAGAGACCTTGTGGACCCAATAAAAGAGCAATACGTGGAGCTACATATGATATGGCAAAGAATGATCCATGGAAGGAATCATTTGAAAGTCTACCAGAATATGCATTTGAGGATATAGCAGACTGGGAGAGGAACTTAATTCAAAATCGTGTCCGTTCCCTCCGTGGAACTTGA 864 0.4201 MSAVSNIYFSSQFTTPLEIDVLSKQSKKKSTCHFVVPIQNNSVRLTGIRCKLSDSGIEENPASKRAINSRNRMEEYNTAMRRRMRNPYEYHHELGMNYTLITDDLIVGSQPQKPEDIDHLKKEEGVAYILNLQQDKDVEYWGIDLQSIITRCHELGIRHMRRPAKDFDPNSLRNELPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWLCGMNLNSAYDMLTSKRPCGPNKRAIRGATYDMAKNDPWKESFESLPEYAFEDIADWERNLIQNRVRSLRGT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01286 287 SMART dsp_5 97 247 IPR020422 GO:0006470|GO:0008138
Bach3g01286 287 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 85 238 IPR029021 -
Bach3g01286 287 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 254 IPR020422 GO:0006470|GO:0008138
Bach3g01286 287 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 80 287 - -
Bach3g01286 287 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 233 IPR000387 GO:0016311|GO:0016791
Bach3g01286 287 Pfam Dual specificity phosphatase, catalytic domain 118 237 IPR000340 GO:0008138|GO:0016311
Bach3g01286 287 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 14 256 - -
Bach3g01286 287 Gene3D Protein tyrosine phosphatase superfamily 80 287 IPR029021 -
Bach3g01286 287 CDD DSP_laforin-like 96 243 IPR045204 GO:0019203
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01286 Bach-Chr3 22653689 22655647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01286 1 287 Protein tyrosine phosphatase (PTP) family AT3G10940 68.403 1.95e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01286 - - gmx:100787079 465.692