Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01251 ATGACATCCATGCTTCTCGTTGGTGGAGTTGAAGTCAAAGCAGACATGAAGAAAATAGAGGAAGAGGGGGCAAATATATTGATTGGAACACCTGGGCGGCTATATGATATAATGGATCGTATGGATATCTTGGATTTTAAAAACCTGGAGATTTTGATTGTAGATGAGGCTGATAGACTTTTAGATATGGGATTCCAGAAGCAGATAACCTCAATTATATCCCGCTTGCCAAAGCTTCGTAGTACTGGTCTTTTCTCTGCTACTCAAACTGAGGCCGTTGAAGAGCTTTCTAAAGCAGGATTGAGGAATCCTGTGAGGGTTGAAGTTCGGGCAGAAGCAAAATCAATAAATGATGCTGTAACATCACAACAACTAGCCTCTTCAAAGACACCTTCAGGACTTCGCATTGAGTATATGGAATGTGAGGCAGACAAGAAACCATCTCAGCTTGCAGATATACTTATTCAGAATCGCTCAAGAAAAATTATAATATATTTCATGACTTGTGCTTGTGTTGACTATTGGGGAGTTGCCCTTACTCGCCTTTCTGTTTTAAAAGGTTTCTCTTTGATTCCCCTTCATGGGAAGATGAAGCGGACTGTCAGGAAGAAAGCACTTGCTTCATTCATCTCTCTTTCAAATGGCGTTCTTTTATGTACTGACGTTGCTGCACGAGGACTTGACATACCAGGTGTTGATTGTATAGTGCAGTATGATCCCCCTCAAGATCCAAAGGTTTTCATACATAGAGTTGGCCGAACTGCTCGGCTGGGTAAAGAAGGACATGCTATTGTCTTCTTATTGCCAAAGGAGGAATCTTATGTAGAATTCCTGCGCATGAGAAGAGTCCCTCTTCAAGAAAGAAGATGCTCTGATGAGGCATCTGATGTTGTTCCTCAGGCAGAAGTGCTTACTAATTCTATCTTGTTCAAATCTCCAAACATGACCGAGATGTCATGGAGAAAGGACTCAGAGCATTTGTTTCTTATGTGGAAAGAACATGAAATTGGTAAGTTGGCTATGGGATATGGATTATTGCAACTTCCTTCAATGCCAGAGGTAAAACACCACTCGCTCTCAACTGAGGGGTTTGAACCTGTTGAAGATGTCAATTTGGAGGACATTAAGTACAGGGATAAATCTCGTGAGAAACAAAGGAAGAATAACATGCTAGCAAAGAAAGATGCCAAAGAGAAAGAGGCAAAACCTCAAAACCCCAGCAAAAACCCAATTGCAGCTGTCACGAGGAAAAAAACAGCCAAACAGAGACGTGCTCAGCAGACAGTTGAAGATGAGGATGAGTTAATGCGAGAATACCGTTTGTTGAAGAAATTGAAGAAAGGAACTATTGATGAAAGTGAATATGCAAAGTTAACAGGCACTGAGGAACTACTTTTGAGTGCACAATTGGCTTGCCTAGTTATACTGATCTGGACATTGCCTTTGTTTGAGAGGGAGGGATCTTCTTTTGTTCAAGTTGTTTCCCAACCACTGTCCTTTCGAAGCAAGATACAAGTCATCTAG 1524 0.4134 MTSMLLVGGVEVKADMKKIEEEGANILIGTPGRLYDIMDRMDILDFKNLEILIVDEADRLLDMGFQKQITSIISRLPKLRSTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSINDAVTSQQLASSKTPSGLRIEYMECEADKKPSQLADILIQNRSRKIIIYFMTCACVDYWGVALTRLSVLKGFSLIPLHGKMKRTVRKKALASFISLSNGVLLCTDVAARGLDIPGVDCIVQYDPPQDPKVFIHRVGRTARLGKEGHAIVFLLPKEESYVEFLRMRRVPLQERRCSDEASDVVPQAEVLTNSILFKSPNMTEMSWRKDSEHLFLMWKEHEIGKLAMGYGLLQLPSMPEVKHHSLSTEGFEPVEDVNLEDIKYRDKSREKQRKNNMLAKKDAKEKEAKPQNPSKNPIAAVTRKKTAKQRRAQQTVEDEDELMREYRLLKKLKKGTIDESEYAKLTGTEELLLSAQLACLVILIWTLPLFEREGSSFVQVVSQPLSFRSKIQVI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01251 507 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 53 61 IPR000629 -
Bach3g01251 507 Gene3D - 1 118 IPR027417 -
Bach3g01251 507 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 107 IPR014001 -
Bach3g01251 507 CDD SF2_C_DEAD 137 267 - -
Bach3g01251 507 MobiDBLite consensus disorder prediction 376 404 - -
Bach3g01251 507 Pfam Helicase conserved C-terminal domain 146 258 IPR001650 -
Bach3g01251 507 Coils Coil 380 402 - -
Bach3g01251 507 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 149 305 IPR001650 -
Bach3g01251 507 MobiDBLite consensus disorder prediction 376 431 - -
Bach3g01251 507 Gene3D - 136 338 IPR027417 -
Bach3g01251 507 Pfam DEAD/DEAH box helicase 4 96 IPR011545 GO:0003676|GO:0005524
Bach3g01251 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 278 IPR027417 -
Bach3g01251 507 PANTHER RNA HELICASE 4 394 - -
Bach3g01251 507 SMART helicmild6 173 258 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01251 Bach-Chr3 22396363 22399963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01251 7 272 Eukaryotic Initiation Factors Gene Family AT3G13920 29.963 2.70e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01251 K14809 - vvi:100260487 718.768