Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01249 ATGGGTGGGAATACCCCATGCGCTTCATGCAAGTTACTACGACGCCGTTGCGCCAAGGACTGCATCTTCGCCCCTTATTTTCCCTCCGATGACCCCCAAAAATTTGCCATAGTTCACAAGGTTTTTGGTGCTAGCAACGTTAGCAAAATGTTGCAGGAACTTCCGGTTCACCAGAGAGCAGACGCAGTGAGCAGTTTAGTGTATGAAGCAAATGCTAGAGTCCGAGACCCAGTTTACGGTTGTGTTGGAGCCATATCTTACCTGCAGAACCAGGTCTCAGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGGTGCTCTGCATCCAGATGCAGAATGAGCCAGCAATGCCAAATCCAGAACTATCTGAGATTGACCCAGATCAGAAATCTTACTTTCTCCAAAATGACCTCCCTCAGTACTTCAATTTTGCCTCTTCTAGCAATGTAATCCATGACTCTCTCAAGAGAGAGACCATTTTTGGACACGACATGGTTTCTTAATAAAATTG 512 0.4648 MGGNTPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEVLCIQMQNEPAMPNPELSEIDPDQKSYFLQNDLPQYFNFASSSNVIHDSLKRETIFGHDMVS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01249 167 Coils Coil 85 105 - -
Bach3g01249 167 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Bach3g01249 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 121 - -
Bach3g01249 167 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01249 Bach-Chr3 22383630 22384301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01249 3 134 AS2 family AT2G30130 82.707 1.71e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach3g01249 LOB 6.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01249 - - gmx:121173085 303.138