Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01235 ATGAAAGCCATGAAGGGCTACGAGCCCCGTTCAAGCTCCTCCTGTGCAGCCTGCAAGTTCTTGAAGAGAAGATGCATTCCCAACTGCATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAAGTTCACAAGGTGTTTGGAGCAAGCAATGTGAGCAAGATCCTAATAGAAGTTCCAGAGGAGCAGAGAGAAGACACGGTGAATTCGCTGGCGTATGAGGCTGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATTGGTGCCATAGCTTTGTTGCAGAGGAAGATGGTGGAGCTCCAACATGACTTGGCCATTGCAAAAGCTCGTCTTGCTCGTTATGCAACTGTTTCTGCAACTGCTGCTGCTACCACACCTTCTTCCACTGATATCTTGAATTCCCATGTTAGCTTGGATCCTTTCCCTGAGTTCTCCACTTGCAGCGATTTCAATGATAGCTTCTGCCTCAGTACTTCTTCACCGTCTCAATTATTGAGTCGAAATGAAACGGTGGATGACTTTATTCAATTTCCATATATATTTTGA 555 0.4559 MKAMKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKARLARYATVSATAAATTPSSTDILNSHVSLDPFPEFSTCSDFNDSFCLSTSSPSQLLSRNETVDDFIQFPYIF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01235 184 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Bach3g01235 184 Coils Coil 93 113 - -
Bach3g01235 184 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Bach3g01235 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01235 Bach-Chr3 22307794 22308348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01235 4 153 AS2 family AT3G11090 65.563 1.97e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach3g01235 LOB 7.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01235 - - gmx:100777635 292.737