Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01230 ATGAACGTCGACGATGCATCATCAACCCCACCTTCTCTGCACCCTCACCCACCCCAAGAAACCACCACCACCGCTCCCACCACCACTCCTTGTGAAACATCTAATAGCAGCAGCAGCAACAACAGCAACTGTAACAGTAACAGCAACAGCACCAGTCGCAAAGGCAAAGGTGGTCCTGACAACAACAAATTTAGATACCGTGGTGTGAGACAGCGAAGCTGGGGCAAATGGGTGGCCGAGATCCGTGAGCCACGCAAGCGGACCCGCAAGTGGCTTGGCACTTTTGCCACCGCCGAGGACGCCGCCAGAGCCTACGACCGCGCTGCCATCATCCTCTACGGCTCTAGGGCTCAGCTTAACCTTCAACCTTCTGGCTCGTCCTCTAATTCATCCTCTCGTGGCTCATCCTCTTCTTCTTCTACACAGACGCTTCGACCCTTACTTCCTCGTCCCTCTGGCTTTGGCTTCACCGTCTCTTCCTCATCCTCGGCAGCCTACCCTCTTTCTGCGCCGTCATCGGGATTTGTGCCTTACGGGGTTTACAATTATAACCCTAGTGGCGGCGGGAACATCAACACCGCACCCGTTATGTGCCCTATTAATCACATAAACATAGTACAGCATCATCATCATGTTCAACAAGTGGTGCAAATACAACAACCGTACTATCAATCTCCAGATTCTGATCGCAGGAGTGTAGTACAAGGGCAAGGGGGTAACATTGTAGTTGACACCAGTTCCACTTCCAAGAGAGGAACCTCGTATCAGAACCACAATAGTAATCATCAACAGCTGCAACAGCAGCAGCAGCCACAACAACCACAATATCATTGTGTGTCTCATCAACAACAAAATCATGAGAATTGCATGTACGATGAGATGAGCTCCTTGGTGGGTTCCGTGGAGACAAGGTTGTCTTGTACACAGAGTGCTATGCTTGCACCGACGGCACTGGATCCGCCGCTGGGGTTTGCGGCGCCTGCTTCTGGATCTCCACCTATGTGGCCAACGTTGACAAATGAGGAAGAGTATCCAACTAGTTTATGGGACTACAGTGATCCTTTCTTCTTAGATTTCTAA 1080 0.5102 MNVDDASSTPPSLHPHPPQETTTTAPTTTPCETSNSSSSNNSNCNSNSNSTSRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSGSSSNSSSRGSSSSSSTQTLRPLLPRPSGFGFTVSSSSSAAYPLSAPSSGFVPYGVYNYNPSGGGNINTAPVMCPINHINIVQHHHHVQQVVQIQQPYYQSPDSDRRSVVQGQGGNIVVDTSSTSKRGTSYQNHNSNHQQLQQQQQPQQPQYHCVSHQQQNHENCMYDEMSSLVGSVETRLSCTQSAMLAPTALDPPLGFAAPASGSPPMWPTLTNEEEYPTSLWDYSDPFFLDF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01230 359 CDD AP2 65 122 IPR001471 GO:0003700|GO:0006355
Bach3g01230 359 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Bach3g01230 359 MobiDBLite consensus disorder prediction 18 57 - -
Bach3g01230 359 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Bach3g01230 359 MobiDBLite consensus disorder prediction 121 147 - -
Bach3g01230 359 Pfam AP2 domain 65 113 IPR001471 GO:0003700|GO:0006355
Bach3g01230 359 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 30 294 - -
Bach3g01230 359 MobiDBLite consensus disorder prediction 1 68 - -
Bach3g01230 359 MobiDBLite consensus disorder prediction 240 281 - -
Bach3g01230 359 FunFam Ethylene-responsive transcription factor 2 65 123 - -
Bach3g01230 359 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Bach3g01230 359 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Bach3g01230 359 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Bach3g01230 359 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01230 Bach-Chr3 22282807 22283886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01230 53 359 AP2-EREBP Transcription Factor Family AT2G40220 43.692 1.97e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g01230 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01230 K09286 - zju:107404421 244.202