Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01229 ATGACGAGCCAAGACAATCAGGCATTCAATTGGCACTACAGTGAAATCGATGACCGGAACTTGGAAATCCGAGGCCGGACCTTCTTTTTCATCATCCTCCTCTTCTCCATTATCCTTCTCGTTACCCTTCTCTTCCTCTATGCTCGCTGGATCTGCCGCTACCGGGGCAACCTTCCCACCACCTTGGACACTGGCCACGATGGCCTTGCGCCGCCTGCTCCACCACAGGGCCTGGACCCTGCTTCCATTCAGAAATTGCCCATCATTTTACACCAAACACCGTCTGATGCAAATTGTGCATTGGAGGAAACAGAGTGCTGCATCTGCCTCGGGGAGTTCAAAGATGGAGACAAATTGAAGGTTTTGCCTGGCTGTGATCATAGTTTTCACTCTGAGTGCGTTGATAAGTGGCTTGTGAATCACTCTAGTTGCCCACTCTGCAGAGCTTCTCTCAAGCCTGATTCTTGTGCCTTTCCAAGGATTTTGATTCCAGAACCGCCCATCAGGATCAACATCCAATTATAG 525 0.499 MTSQDNQAFNWHYSEIDDRNLEIRGRTFFFIILLFSIILLVTLLFLYARWICRYRGNLPTTLDTGHDGLAPPAPPQGLDPASIQKLPIILHQTPSDANCALEETECCICLGEFKDGDKLKVLPGCDHSFHSECVDKWLVNHSSCPLCRASLKPDSCAFPRILIPEPPIRINIQL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01229 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 155 - -
Bach3g01229 174 FunFam RING-H2 finger protein ATL66 70 153 - -
Bach3g01229 174 SMART ring_2 106 147 IPR001841 -
Bach3g01229 174 SUPERFAMILY RING/U-box 100 154 - -
Bach3g01229 174 CDD RING-H2_EL5-like 105 148 - -
Bach3g01229 174 Pfam Ring finger domain 105 148 IPR001841 -
Bach3g01229 174 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Bach3g01229 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 154 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01229 Bach-Chr3 22278271 22278795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01229 4 155 C3H Transcription Factor Family AT3G11110 42.105 3.23e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01229 - - gmx:100803278 234.572