Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01228 ATGGTCGGTGTGAGCTCTAACAGTGCCGGCGATGATCGGATGAAAGGGTCCTGGAGTCCCCACGAGGACGCCACTCTGATAAAGCTGGTGGAGCAGCATGGGCCTCGCAATTGGTCCCTTATCAGCAGCGGCATCCCTGGCCGCTCCGGCAAGTCTTGCAGGCTCAGATGGTGCAATCAGCTCAGCCCCGACGTGCAGCATCGACCATTTACAGCCGCGGAGGATGCCATCATCATCCAGTCTCATGTCGTCCACGGCAACAAGTGGGCAACCATCGCACGCCTCTTGCCTGGTCGTACTGATAATGCTATAAAAAACCACTGGAACTCCACGCTTCGTCGCAGGCGAGCGGCAGCGGCAGCGGCGGGGGAGTTGTCATCGCCGTCTGCATCGACGGAGTCCAACTCGACTTTTCCAATGAAGCGGCCCGCGATAGGTGATCCCAACGATGCCTCCGATCGGTCCGAATTCGGGCAGTCATTGAAGCGGCCGTGTCTACGGGGAATTTCATCGGCGAATAACAGTTCCAATGATGAAAATGACGAGAAGAGGTTGAAGGGTCCGGTGACATCACTGACATTGTTTCCTCCTGGAGAGAGCATAACACCGGAGGCAGCCGCGGAGGGCAACAAAGTGGAGGAAGAGAATGAGAAAGAGGGGAAGGGGGAGGAGAAAGAGGAGACTTGCTTGCTGAGAATGATGCAGCGCATGATAGCGGCGGAGGTTAGGAGTTACATTGATAACTTAAGCCCTACCGATAGGCAAGCAATTAGAATTGGGTTGGGCCTTGTTCATAAGTAA 801 0.5531 MVGVSSNSAGDDRMKGSWSPHEDATLIKLVEQHGPRNWSLISSGIPGRSGKSCRLRWCNQLSPDVQHRPFTAAEDAIIIQSHVVHGNKWATIARLLPGRTDNAIKNHWNSTLRRRRAAAAAAGELSSPSASTESNSTFPMKRPAIGDPNDASDRSEFGQSLKRPCLRGISSANNSSNDENDEKRLKGPVTSLTLFPPGESITPEAAAEGNKVEEENEKEGKGEEKEETCLLRMMQRMIAAEVRSYIDNLSPTDRQAIRIGLGLVHK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01228 266 CDD SANT 69 112 IPR001005 -
Bach3g01228 266 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bach3g01228 266 MobiDBLite consensus disorder prediction 125 139 - -
Bach3g01228 266 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bach3g01228 266 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Bach3g01228 266 MobiDBLite consensus disorder prediction 119 225 - -
Bach3g01228 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Bach3g01228 266 Gene3D - 14 66 - -
Bach3g01228 266 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach3g01228 266 FunFam MYB transcription factor 15 66 - -
Bach3g01228 266 SMART sant 66 114 IPR001005 -
Bach3g01228 266 SMART sant 14 63 IPR001005 -
Bach3g01228 266 CDD SANT 17 59 IPR001005 -
Bach3g01228 266 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Bach3g01228 266 Gene3D - 68 138 - -
Bach3g01228 266 PANTHER MYB PROTEIN-RELATED 15 169 - -
Bach3g01228 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bach3g01228 266 MobiDBLite consensus disorder prediction 208 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01228 Bach-Chr3 22274321 22275121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01228 12 249 MYB Transcription Factor Family AT4G37260 40.072 1.01e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g01228 Myb_DNA-binding 6.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01228 - - qsa:O6P43_020183 269.24