Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01227 ATGGTTTCTATTTTGGATATGGAAAGTTACTACTATTCTGGCTGGCCTCTAAGCACTAGCTGGCCTCAATGCAACGCTGCAACAAGCAGTGACCCTCCCTTTTCAGTCCCAACACCAATTCTGCCTCATGTTTCTGACTCTAACTCTGCTCAGTTCTATGAGTTCCCTCCTTGGCCTTTACCAATTGAAGGGTCTGCAGAGGATCGAGCTGCGAGTGCTTCCAAGAGTCATAGCCAAGCAGAGAAACGGCGCAGGGATAGGATCAATGCACAACTTGCAACTCTTAGAAAGCTGATTCCCAAATCTGATAAGATGGATAAGGCAGCCTTATTAGGGAGTGTGATAGATCACGTCAAAGATCTAAAGAGAAAAGCTATGGATATTGGCAAAGCTTTAACAGTTCCCTCTGAAATTGATGAAGTAACGATAGACTATGACCCTGCTCAAGATGAAACTTGCACTAAAATAAGCAAATTTAAAGACAAAATCATTATCAAGGCTTCTGTTTGCTGTGATGATAGACCAGAACTGTTCTCAGAACTCATTCAAGTCCTCAAAGGCTTGAGATTAACTGCAGTAAAAGCTGATATAGCAAGTGTTGGCGGCAGAATTAAAAGCATATTGGTGCTCTGCTCCAAGGATAGTGAAGAGGGTGTTTGCCTAAGCACTCTTAAACAGTCACTTAAATCAGCTGTGAGCAAAGTTGCTACTTCATCCATGGCATCAAACTGTACCACTAGAAGTAAAAGGCAGAGGTTCTTCTTGCCTTCTCACTACATGCAGTAA 786 0.4262 MVSILDMESYYYSGWPLSTSWPQCNAATSSDPPFSVPTPILPHVSDSNSAQFYEFPPWPLPIEGSAEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDIGKALTVPSEIDEVTIDYDPAQDETCTKISKFKDKIIIKASVCCDDRPELFSELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKDSEEGVCLSTLKQSLKSAVSKVATSSMASNCTTRSKRQRFFLPSHYMQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01227 261 Pfam Helix-loop-helix DNA-binding domain 75 121 IPR011598 GO:0046983
Bach3g01227 261 SMART finulus 78 127 IPR011598 GO:0046983
Bach3g01227 261 Gene3D - 66 128 IPR036638 GO:0046983
Bach3g01227 261 MobiDBLite consensus disorder prediction 64 86 - -
Bach3g01227 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Bach3g01227 261 CDD ACT_UUR-ACR-like 168 203 - -
Bach3g01227 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 124 IPR036638 GO:0046983
Bach3g01227 261 PANTHER TRANSCRIPTION FACTOR BHLH30 65 258 IPR045847 GO:0003700|GO:0006355
Bach3g01227 261 CDD bHLH_AtAIG1_like 67 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01227 Bach-Chr3 22271357 22272384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01227 68 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 47.475 1.48e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach3g01227 HLH 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01227 - - gmx:100799687 389.037