Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01213 ATGACCTCAGCTAGTCACCACCCACCACCACCGCCTCTCTCGGACTCCGACGCCGATTCTGATAACGGGCATTCTACTTCCGAGCTCCTCCGTCATTCGGACCTCTCGGACTCTATATTCAAATCCTATTTCGAATTCACTGGCCAATCAACGGCAACTGCAGCTGATCTCTCAAAAATCCAATCTTTTCTCACTTCCTCCTCCTCTGGCGCTCTATCATGTTTGATATGCCTCGAACGCATCAGAATCTCCGATCCCACATGGTCCTGTACCTCCCTCTGCTTTGCTGTCTTCCATCTATTTTGCATTCAGAGCTGGGCACGCCAGGCAACCGACCTTGCCGCCGCACGTGCTGCAACGCGCCTCCCCATTTCAGCTGACAAGGCTGCAGAATCTGCTGTATGGAACTGCCCCAAATGCAGGGTCGAATACTCCAAAACGCAACTCCCCAAATCTTATATGTGTTTCTGTGGAAAATTGGAGAACCCTCCCAGTGATGATCCATGGATTTTGCCACATTCATGTGGTGAGATTTGCGATAGGCCATTGAAGAACAATTGCGGCCACCATTGCCTGTTGTTGTGCCATCCTGGGCCATGTCCATCGTGCCCAAAACTTGTCAAAGTTCGGTGCTTTTGCAGGTCTCTCGAAGACGTTCGGCGATGTGGGTTTAAGGAATTCTCCTGCAATAATCCCTGTTCAAAGGTCTTGGACTGTCGTGCCCACAGGTGCTCGGAGATTTGCCACGATGGTCCATGCCCACCTTGCCGAGCCCGTGGGGTTTATTGGTGCCAATGCAGGAACAAGAAGGAGGAGAGGGAGTGTTGTGATCGCAATTTCCAATGTGATAAGCCGTGTGAGAAGGTACTTAGATGTGGGAAGCATGTTTGTAAGAAAGGGTGTCATTCGGGTGACTGTGGTGAGTGCCCTTTCCAGGGGAAGAGAACTTGTCCCTGTGGAAAGAGAGTATATGAAGGAATGCCTTGCGATGCTGCGGTACCTTTGTGTGGGGAGACCTGTGATAAGATGTTGGCTTGCGGGTACCATAGGTGTCCAGAGCGATGCCACCGCGGGCCATGCATTGAGACTTGCAGAATTGTTGTCAAGAAGTCCTGCCGCTGTGGGAGTTTGAAGAAAGATGTTCCTTGCTATCAAGATTTGTCATGTGAAAGGAAGTGTCAGAGGATACGTGACTGTGGCCGGCACCCATGTAAACGCCGCTGCTGTGAAGGGGAATGCCCTCCATGCTCAGAGATATGTGGCAGGAAGCTTCGTTGTAGGAACCATAAATGCCCATCACCATGCCATAGAGGTGACTGTGCTCCTTGTCCAATAATGGTGACAATCTTGTGTGCATGTGGTGAGACGCATTTTGAGGTTCCTTGTGGTGCTGAGATGGACCAAAAGCCACCTAAATGTCGTAAAAAATGTGACATTACTCCTTTGTGCAGGCATGCATCGACATGCAAGCCACACAAATGCCATTATGGAGCCTGCCCCCCTTGTCGGCTACCTTGTGGAGAAGAGTTTCCATGTGGCCACACATGCAAATTAAGGTGTCATGGAGCTAAACCTCCTCCTAAGCCAGAGTTTACGCTGAAACCAAAGAGAAAGAAGACAATACAACAGAGTGAATGTGTTCCTGGCACTCCTTGCCCTCCTTGCCCAGAACTTTTATGGAGATCGTGTCTTGGCCAACACTTCGGAGCAGAGAGAATGATGGTCTGCTCTGATAAATCACAATTCTCCTGTGAAAATTTGTGCGGAAACCCTCTACCATGTGGTAATCATTATTGTACTAAAACCTGTCATGCCCTGGAGAGCCAGGCAACCTTGAACCAACTACAGAGAAGTGAGCCTTGTGAAAATTGTCATCTTCATTGCCAAAAGGAAAGAAAGCCTATCTGTCCACATCCCTGTCCTCGGAGGTGCCATCCTGGAGACTGCCCGCCATGCAAAGTGCTCATTAAACGATCATGTCACTGTGGCTCAATGGTCCATGCTTTTGAGTGCATATATTACAATAGCTTGTCTGCAAAGGATCAAGAGACTGCCCGCTCATGCAGTGGTCCTTGCCATAGAAAGTTGCCAAATTGTACACATCTATGCCCTGAGAAATGTCATCCTGGTCCATGCCCATATCCTGAGAAATGCAGTAAAAAGGTCAATGTTCGTTGCAAATGCCAAACATTGAAAAAAGAGTGGCTATGTCAAGATGTCCAAGCAGCTTACCATGCTACTGGTTGCGATCCAAAAGAAATACCTAAAAATCAGTATGGGGTTGGCCTTATTCCTTGCAATTCTGATTGTAAGAGTAGAGTGCAGGTTGTTGAATCAGAACTACAGTTACGTAAATCTAGAGTTGTAGAGGAGAAAGAGCCAGATACTGAAAAGTCTGCTCCAAAGCGAAGAAAAAGGCGGGAACGGGTACAAGAATCCAAGCAAGCAACAAAAATGCAGAAAATTGTTTCCACCGCAAAGCAGTTTCTTCTATTTGTCTTTCTTTTCATGGCTCTCCTTGCTGCTGCATATTATGGTTACAATGGTCTTCTATGGCTCTCTGATTGGATGAATGAAATTGACGAGCAAAGACAAAGAAGATATCCTCGAATTTCGTGA 2619 0.4773 MTSASHHPPPPPLSDSDADSDNGHSTSELLRHSDLSDSIFKSYFEFTGQSTATAADLSKIQSFLTSSSSGALSCLICLERIRISDPTWSCTSLCFAVFHLFCIQSWARQATDLAAARAATRLPISADKAAESAVWNCPKCRVEYSKTQLPKSYMCFCGKLENPPSDDPWILPHSCGEICDRPLKNNCGHHCLLLCHPGPCPSCPKLVKVRCFCRSLEDVRRCGFKEFSCNNPCSKVLDCRAHRCSEICHDGPCPPCRARGVYWCQCRNKKEERECCDRNFQCDKPCEKVLRCGKHVCKKGCHSGDCGECPFQGKRTCPCGKRVYEGMPCDAAVPLCGETCDKMLACGYHRCPERCHRGPCIETCRIVVKKSCRCGSLKKDVPCYQDLSCERKCQRIRDCGRHPCKRRCCEGECPPCSEICGRKLRCRNHKCPSPCHRGDCAPCPIMVTILCACGETHFEVPCGAEMDQKPPKCRKKCDITPLCRHASTCKPHKCHYGACPPCRLPCGEEFPCGHTCKLRCHGAKPPPKPEFTLKPKRKKTIQQSECVPGTPCPPCPELLWRSCLGQHFGAERMMVCSDKSQFSCENLCGNPLPCGNHYCTKTCHALESQATLNQLQRSEPCENCHLHCQKERKPICPHPCPRRCHPGDCPPCKVLIKRSCHCGSMVHAFECIYYNSLSAKDQETARSCSGPCHRKLPNCTHLCPEKCHPGPCPYPEKCSKKVNVRCKCQTLKKEWLCQDVQAAYHATGCDPKEIPKNQYGVGLIPCNSDCKSRVQVVESELQLRKSRVVEEKEPDTEKSAPKRRKRRERVQESKQATKMQKIVSTAKQFLLFVFLFMALLAAAYYGYNGLLWLSDWMNEIDEQRQRRYPRIS 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01213 872 CDD NF-X1-zinc-finger 175 223 - -
Bach3g01213 872 CDD NF-X1-zinc-finger 282 329 - -
Bach3g01213 872 MobiDBLite consensus disorder prediction 787 802 - -
Bach3g01213 872 MobiDBLite consensus disorder prediction 1 15 - -
Bach3g01213 872 Pfam NF-X1 type zinc finger 512 521 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 399 417 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 493 503 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 700 718 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 292 310 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 594 604 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 638 653 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 346 364 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 187 204 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 242 257 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 Pfam NF-X1 type zinc finger 420 444 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 MobiDBLite consensus disorder prediction 787 817 - -
Bach3g01213 872 CDD NF-X1-zinc-finger 416 464 - -
Bach3g01213 872 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 49 521 IPR034078 GO:0003700
Bach3g01213 872 MobiDBLite consensus disorder prediction 1 27 - -
Bach3g01213 872 SMART znfxneu3 594 626 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 636 654 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 346 366 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 426 445 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 399 418 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 239 258 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 699 720 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 489 504 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 292 311 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 512 557 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SMART znfxneu3 187 205 IPR000967 GO:0005634|GO:0008270
Bach3g01213 872 SUPERFAMILY RING/U-box 72 149 - -
Bach3g01213 872 CDD NF-X1-zinc-finger 336 385 - -
Bach3g01213 872 CDD NF-X1-zinc-finger 229 277 - -
Bach3g01213 872 CDD NF-X1-zinc-finger 389 437 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Bach3g01213 zf-NF-X1 0.0023 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01213 K15683 - qsa:O6P43_020197 1494.56