Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01196 ATGGCGGTGAAACCCACAAAGGCCGAGAAGAAGATTGCATACGATGCTAAGCTGTGCCAGCTTCTGGAGGAATACACTCAGATCCTAGTTGTGGCGGCTGACAATGTTGGTTCTAACCAACTTCAGAACATCCGAAGGGGTCTGCGTGGTGACTCAGTGGTTCTCATGGGTAAGAACACTATGATGAAGCGCTCGGTCAGGATTCATGCTGAGAAAACCGGCAACCAGGCATTCCTCAACCTTATCCCCCTCCTTGTGGGCAACGTGGGATTGATTTTCACTAAAGGTGACTTGAAGGAGGTCAGCGAGGAGGTTGCTAAGTACAAGGTCGGAGCTCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTCCCTCCTGGCAACACAGGGCTTGACCCATCTCAGACCTCTTTCTTCCAGGTGCTTAATATTCCTACAAAGATTAACAAGGGTACTGTTGAAATTATTACCCCTGTGGAACTCATTAGGAAGGGTGAGAAGGTGGGCTCTTCTGAGGCTGCTTTGCTTGCAAAGCTTGGGATTAGGCCCTTCTCGTATGGTCTTGTGGTTCAAACTGTTTATGATAATGGATCGGTGTTTAGTCCTGAGGTGCTTGATCTTACTGAGGATGACCTCATTGAGAAGTTTGCTGCGGGCGTCTCCATGGTGACCTCACTTTCACTGGCTATCTCATACCCTACCCTTGCAGCGGCCCCGCATATGTTTATCAATGGCTACAAGAATGTCCTGGCTGTTGCTGTTGCCACTGAGTATTCCTTCCCTCAAGCTGATGAGGTTAAGGAGTACCTAAAGGATCCAAGTAAATTTTCTGTTGCTGCTGTTGCTGCTCCTGTTGCTGATTCAGGCTCTGCTCCTGCCGCTGCTGAGGAGGAAAAGAAGGAAGAGCCAGCAGAAGAATCTGATGATGATATGGGTTTTAGCTTGTTTGACTAA 960 0.4844 MAVKPTKAEKKIAYDAKLCQLLEEYTQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGEKVGSSEAALLAKLGIRPFSYGLVVQTVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISYPTLAAAPHMFINGYKNVLAVAVATEYSFPQADEVKEYLKDPSKFSVAAVAAPVADSGSAPAAAEEEKKEEPAEESDDDMGFSLFD 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01196 319 CDD Ribosomal_P0_L10e 9 185 - -
Bach3g01196 319 MobiDBLite consensus disorder prediction 288 319 - -
Bach3g01196 319 FunFam 60S acidic ribosomal protein P0 113 186 - -
Bach3g01196 319 Pfam 60s Acidic ribosomal protein 234 318 - -
Bach3g01196 319 MobiDBLite consensus disorder prediction 303 319 - -
Bach3g01196 319 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 303 - -
Bach3g01196 319 Pfam Ribosomal protein L10 7 108 IPR001790 -
Bach3g01196 319 PIRSF L10E 1 319 IPR030670 GO:0042254
Bach3g01196 319 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Bach3g01196 319 Gene3D - 6 209 IPR043141 -
Bach3g01196 319 Gene3D - 114 185 IPR043164 -
Bach3g01196 319 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01196 Bach-Chr3 22019893 22021815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01196 1 318 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 85.220 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01196 K02941 - thj:104810080 542.347