Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01182 ATGGAAACTCTGTATCCATCTTCTTTTATGCCAAGTCCAGATTGGCTTTTGCAAGAGAGTCACACCACAGAATGGACTAGAGAACAGAATAAGCTATTTGAAAGCGCCCTTGCCATATATGACCAGGAAACCCCAGACCGATGGCTGAAGGTTGCAGCTATGATTCCAGGGAAGACTGTGTTTGATGTGATGAAGCAGTACAGGGAATTATTAGAAGATGTAAGTGAAATAGAGGCAGGGCGAGTTCCAATTCCTGGATATCCTCCCTCTTCCTTCACGTTTGAGTTGGTTGAGAATCATGATTATGATGCATATAGAAAGAGGCCTGCAGCAGCTAGGGGTTCTGAACAGGAGAGGAAGAAAGGGGTTCCATGGACAGAAGATGAACACAGGCGTTTTCTGATGGGACTTCTGAAGTATGGTAAAGGGGACTGGAGAAATATCTCTCGTAATTTTGTAGTCACTAAGACTCCTACTCAAGTGGCAAGCCATGCTCAGAAGTACTATATAAGGCAGAACCTTTCTGGATTGAAAGACAGAAGGAGACCCAGTATACATGATATTACCATTGTTAATCTTACAGAATCCATCACAGAAGATAACAGCAAGTCCCTTGCATTCAATGAGTCTCCTTTGCTCTCGCCACACCAGAAGTCCCCAAAAGTACAAGTTAATTGGAATCAGCATAATGATGGGTCACTAATGGTTTTCGACCAAAATAGTGACAGTTTATTCATGTCATCTTCACCTGATATTGCTTCAAAGGGCCTAAAACTGCAGGAGCAGGACCTATATGACTGTTTGCATGGGGCATATGCCAACTTCAAAACTCAGGGTTTCAGGACTGCTTCTAGAGAGTTCAATAAGGCAGCTACTTTTGGTATCCATGCATTGTAA 897 0.4292 METLYPSSFMPSPDWLLQESHTTEWTREQNKLFESALAIYDQETPDRWLKVAAMIPGKTVFDVMKQYRELLEDVSEIEAGRVPIPGYPPSSFTFELVENHDYDAYRKRPAAARGSEQERKKGVPWTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQNLSGLKDRRRPSIHDITIVNLTESITEDNSKSLAFNESPLLSPHQKSPKVQVNWNQHNDGSLMVFDQNSDSLFMSSSPDIASKGLKLQEQDLYDCLHGAYANFKTQGFRTASREFNKAATFGIHAL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01182 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 173 IPR017930 -
Bach3g01182 298 Pfam Myb-like DNA-binding domain 124 168 IPR001005 -
Bach3g01182 298 CDD SANT 124 168 IPR001005 -
Bach3g01182 298 Gene3D - 18 84 - -
Bach3g01182 298 SMART sant 121 171 IPR001005 -
Bach3g01182 298 SMART sant 21 73 IPR001005 -
Bach3g01182 298 ProSiteProfiles SANT domain profile. 125 173 IPR017884 -
Bach3g01182 298 FunFam transcription factor MYB1R1 123 174 - -
Bach3g01182 298 SUPERFAMILY Homeodomain-like 118 173 IPR009057 -
Bach3g01182 298 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 18 241 IPR043363 -
Bach3g01182 298 Gene3D - 123 174 - -
Bach3g01182 298 ProSiteProfiles Myb-like domain profile. 25 71 IPR001005 -
Bach3g01182 298 NCBIfam myb-like DNA-binding domain, SHAQKYF class 120 172 IPR006447 GO:0003677
Bach3g01182 298 SUPERFAMILY Homeodomain-like 23 77 IPR009057 -
Bach3g01182 298 FunFam Transcription factor SRM1 17 84 - -
Bach3g01182 298 ProSiteProfiles Myb-like domain profile. 117 169 IPR001005 -
Bach3g01182 298 CDD SANT 24 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01182 Bach-Chr3 21925832 21927142 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bach3g01182 Myb_DNA-binding 4.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01182 - - gmx:778039 449.129