Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01169 ATGACCCAAGTAGACCGCGCTGGCTCTCCCTCCGGCGATGCTGTTCACAATGGCGTCGCGGATTCCGAAATCGCTGGCGGTGATACCGAGTTATCGGCACTTGGCGACGGAAACGTTGCCAGTAGAGTGAAGGGACCCTGGTCTCCGGAAGAGGACGCCGTTCTTAGTCAATTGGTGAGCAAGTTTGGGGCCAGGAATTGGAGCATGATTGCTCGAGGGATACCTGGTCGGTCCGGCAAGTCGTGCCGTCTCCGATGGTGTAATCAGCTCGACCCTTGTGTTAAACGCAAGCCCTTTACTGAGGAAGAGGATCGTATAATAGTTGCAGCTCATGCAATCCATGGAAACAAATGGGCAGCAATTGCAAGGCTTCTTCCAGGTAGAACAGATAATGCTATCAAGAACCATTGGAATTCTACACTGAAGCGCAGGTGTATGGAATTGGGAAGATATGTCCCGGCACATGCTGATGCAATGAGAGACGGCAGCCCTGACAAAACAAAGGCATCCTCTGAAGAAACCATGTCAGTTGGGGATAAACCTACAGAAGAGAGAAATGTGATGATGCATAATGGAACTAAGCATCCTGAAGAAAATCCCCAAAGCAAAGATAGCACCAGGGTGGAGGAACATCCTACACTTTGTCGACCAGTAGCACGTGTTAGTGCATTTAGTATTTATAATCCTTCAAACAAGCCAACAACTGGGTCTACAAATTTAAAGATGCTCCCAATGCACGGCCCTTTGATTCAGCCATCCAATGCAGAAGTAGGAACCTGCAAGCTATTTGATGATGTTGGCTTTGAGCCCATCGTTCCATCACAATGTGGCCATGGTTGCTGTACAGCAGATTCGAGGGGAAGCCATTCTCGTGGTTCACTATTAGGTCCTGAGTTTGTTGACTATTTGGATTCCCCAACTTCCTCAAGTCATGAATTGATCTCCATAGCTACAGATTTGAACAACATTGCTTGGATCAAGAGTGGCCTTGAGAATCATGGTACCAGGGTAACAGAAAATCCAGCAAACTTTCCATCATCGCAAGGGGCTACTACTGCTTCACAAATAGACTTCTCAGACTTCATGCACTTTCAAGATGTGTTACCTACGCAGATGCCTAGACAACCTTTTGCCATGCCAGCAGAAGTTTGA 1152 0.4757 MTQVDRAGSPSGDAVHNGVADSEIAGGDTELSALGDGNVASRVKGPWSPEEDAVLSQLVSKFGARNWSMIARGIPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMELGRYVPAHADAMRDGSPDKTKASSEETMSVGDKPTEERNVMMHNGTKHPEENPQSKDSTRVEEHPTLCRPVARVSAFSIYNPSNKPTTGSTNLKMLPMHGPLIQPSNAEVGTCKLFDDVGFEPIVPSQCGHGCCTADSRGSHSRGSLLGPEFVDYLDSPTSSSHELISIATDLNNIAWIKSGLENHGTRVTENPANFPSSQGATTASQIDFSDFMHFQDVLPTQMPRQPFAMPAEV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01169 383 MobiDBLite consensus disorder prediction 1 20 - -
Bach3g01169 383 CDD SANT 98 141 IPR001005 -
Bach3g01169 383 Gene3D - 98 144 - -
Bach3g01169 383 ProSiteProfiles Myb-like domain profile. 91 141 IPR001005 -
Bach3g01169 383 MobiDBLite consensus disorder prediction 156 184 - -
Bach3g01169 383 CDD SANT 46 88 IPR001005 -
Bach3g01169 383 FunFam Transcription factor MYB44 98 144 - -
Bach3g01169 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 145 IPR017930 -
Bach3g01169 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 90 IPR017930 -
Bach3g01169 383 SMART sant 95 143 IPR001005 -
Bach3g01169 383 SMART sant 43 92 IPR001005 -
Bach3g01169 383 PANTHER MYB PROTEIN-RELATED 44 193 - -
Bach3g01169 383 ProSiteProfiles Myb-like domain profile. 39 90 IPR001005 -
Bach3g01169 383 SUPERFAMILY Homeodomain-like 41 137 IPR009057 -
Bach3g01169 383 Gene3D - 43 95 - -
Bach3g01169 383 Pfam Myb-like DNA-binding domain 96 140 IPR001005 -
Bach3g01169 383 Pfam Myb-like DNA-binding domain 44 90 IPR001005 -
Bach3g01169 383 FunFam MYB transcription factor 44 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01169 Bach-Chr3 21855887 21859322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01169 22 368 MYB Transcription Factor Family AT3G55730 47.554 6.84e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g01169 Myb_DNA-binding 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01169 K09422 - gmx:100781228 509.605