Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01168 ATGGCGATTGCAGACAAGTCTCATGTTGTTGATATAGACAATGGTTGTCGTCGGAGCTCTGTCGGCGGCGATGGCAGTGAAGGGTATTCAGAGACTTGCGACAGGCTGTCAGATGACGAGCAGAGAAGCTCGTCCTCCGTTGAGTCTGGTCCGGAGATTGTAGGAGTGTCTGAGAAGGAGAGGAGATCTTCTGCATCCGAGTTTTCGGTAGAGGTGGATCTGGAGAGTGGGGTGGCTGAAACGAAGGTACATTTGGCCACAGTGGAGAGGGATTGTAGGATTTGCCATCTGAGTATGGATATGACTAATCAAGAATCTGGAACCCCCATTGAGCTGGGATGCTCTTGTAAAGACGATTTGGCTGCTGCACACAAACAGTGCGCTGAGGCTTGGTTCAAGATCAAGGGTAACAAAACCTGTGAAATCTGTGGATCAGTTGCACGCAATGTAGCCGGTGCAGTTGAAGTAGAAATGACAGAACAGTGGAACGAGGGAAATGATGCTTCCTTGGTAGCGCCAACTGGAGTTGCGCCTCCTGCAGAAACTCGAACTTTCTGGCAGGGCCATCGCTTCTTGAATTTTCTGCTTGCCTGTATGGTGTTTGCGTTTGTGGTATCATGGCTTTTTCACTTCAATGTGCCTTCATGA 648 0.4938 MAIADKSHVVDIDNGCRRSSVGGDGSEGYSETCDRLSDDEQRSSSSVESGPEIVGVSEKERRSSASEFSVEVDLESGVAETKVHLATVERDCRICHLSMDMTNQESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSVARNVAGAVEVEMTEQWNEGNDASLVAPTGVAPPAETRTFWQGHRFLNFLLACMVFAFVVSWLFHFNVPS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01168 215 ProSiteProfiles Zinc finger RING-CH-type profile. 84 150 IPR011016 GO:0008270
Bach3g01168 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 153 IPR013083 -
Bach3g01168 215 SMART ringv_2 91 144 IPR011016 GO:0008270
Bach3g01168 215 MobiDBLite consensus disorder prediction 13 61 - -
Bach3g01168 215 SUPERFAMILY RING/U-box 89 146 - -
Bach3g01168 215 Pfam RING-variant domain 92 143 IPR011016 GO:0008270
Bach3g01168 215 PANTHER ZINC FINGER, RING-CH-TYPE 13 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01168 Bach-Chr3 21851757 21853853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01168 39 215 C3H Transcription Factor Family AT5G05830 65.730 1.61e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01168 - - gmx:100818979 314.694