Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01157 ATGTGGCCCTTCACTTCATTTGCGAAATTGCGAAACGTTTACCCTGCCATCACTGCTGACACAGCAGTGGCTCTGCACTCAGTCGAGCTGACATTTGACAACACTTTCTCAGTTTCTTCATCAATCATCACCGCTGGTTGGCATCATCTTCTTCACCCTCCTCTACCTCTGTCAAGTATCAACTACCTCCTTCAATCTTCACCTACTCTCTGTCTCTCTCTAAAGCTAACTAAAGTTTCAAGCTTTTCATTCATGGAGGAAAATTTGGACCCTTGCCATGTCCCACAAAAGAGCAGAAAGAACAAGCTCCGTGTAACATCCCAAACCCATCACATTGACACTTTTCAGGCCACCATAGCTCCACCTTTTGAACCAAGTGCACTTACCCCATCATCATCATCTAACCCCAACCCCCTCTTTAACCGTTGTAATTCCCGCGCATTACCCTCCCTTCCTCGTCCCCTAATATTTCACAATTTAACAAACAGCTCACGTGCAATTTCAGATTCCTCTTGGCCTTTTTGTGAGCTTCAGCTTTCCCATGCTATCTCTGCTTCCCAAGGACCAAACGAGGACTGGAAAAACTGGGTTCCAGTGGGTCCCTTTACGGGTTATGCCCTGATATTGAAGCGGTCAAGGTTTCTGAAGCCTGCACAGCTACTTCTTGAAGATTTCTGTGGCGGAAGAGCATCACATTCTCCACCATTGGACTGCTTAAGCGAAAATGGAGTTCGTAAGGACCCCATTGTTGGTGGGGATCGAACCCTCCATCACAGGAGGGATTCTATACTCATGTCCTTGCTTGAGGAGGTGTACAAGAAATATACGCTATACTGGCAACAGACGCAGTCAGTGGTGGCATCATTTCAAAAAGTTGCTGGGCTTGGAGATGCCTCTCCTTACATATCGTTTGCTATCAAAACCATTTACAAGCATTTTGGATGCTTGAAGAATGCCATAAACGATCAGCTTCAGTTTACGAGCAAGATTCCTGCTGCTAATAGTGTCGGGGAAAAGGAAATTCTAAGGTTGTCAACATTTGAAGCGGAGCTTCGTTCACCAAAATCAGCTCAGAGCTTAACCTTTGTTCAGCGACCTCAAAGGGGACTCCCTGATCAAGCTGTAGCTGTGCTCAGGACGTGGCTCTTTGAACACTTCCTGCACCCTTATCCTTCTGATTCAGAAAAGCATTTCTTGGCTCAACAAACAGGTCTTTCCAGAAGTCAGGTTTCCAATTGGTTCATAAATGCAAGAGTGAGAATCTGGAAGCCCATGGTGGAAAAGATGCACATGGTTGAGAAACAGCATGCTCAAATGCCTGTTGTTGGACCATCTATAGCAAAACAAGCGTACATGAGAAATCTGCTGCAACCAAGAAGAAGCCTAGAAGCACAAAATGTCCAAAGCAAACGCTCAAAACATGAAGTTCCTAGTATTTCTGGTCAGAGTGAAGAACAAGGGATTGCATCGTACCCTACTTTTTCAGCCAATTCCCACGTTAGGTTTGTGGATTTAGAACTAATGGAAGCAACAGATTGTCTTTAG 1545 0.4511 MWPFTSFAKLRNVYPAITADTAVALHSVELTFDNTFSVSSSIITAGWHHLLHPPLPLSSINYLLQSSPTLCLSLKLTKVSSFSFMEENLDPCHVPQKSRKNKLRVTSQTHHIDTFQATIAPPFEPSALTPSSSSNPNPLFNRCNSRALPSLPRPLIFHNLTNSSRAISDSSWPFCELQLSHAISASQGPNEDWKNWVPVGPFTGYALILKRSRFLKPAQLLLEDFCGGRASHSPPLDCLSENGVRKDPIVGGDRTLHHRRDSILMSLLEEVYKKYTLYWQQTQSVVASFQKVAGLGDASPYISFAIKTIYKHFGCLKNAINDQLQFTSKIPAANSVGEKEILRLSTFEAELRSPKSAQSLTFVQRPQRGLPDQAVAVLRTWLFEHFLHPYPSDSEKHFLAQQTGLSRSQVSNWFINARVRIWKPMVEKMHMVEKQHAQMPVVGPSIAKQAYMRNLLQPRRSLEAQNVQSKRSKHEVPSISGQSEEQGIASYPTFSANSHVRFVDLELMEATDCL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01157 514 SMART HOX_1 364 428 IPR001356 GO:0003677
Bach3g01157 514 ProSiteProfiles 'Homeobox' domain profile. 361 424 IPR001356 GO:0003677
Bach3g01157 514 MobiDBLite consensus disorder prediction 462 484 - -
Bach3g01157 514 SUPERFAMILY Homeodomain-like 365 434 IPR009057 -
Bach3g01157 514 Pfam Associated with HOX 208 320 IPR006563 -
Bach3g01157 514 Gene3D - 362 437 - -
Bach3g01157 514 CDD homeodomain 365 425 IPR001356 GO:0003677
Bach3g01157 514 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 133 463 - -
Bach3g01157 514 SMART prehox3 203 322 IPR006563 -
Bach3g01157 514 Pfam Homeobox KN domain 381 420 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01157 Bach-Chr3 21741674 21743987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01157 198 433 Homeobox Transcription Factor Family AT5G02030 49.421 3.03e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach3g01157 POX 8.5e-25 No_clan