Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01140 ATGGAGGAATCTCAGTACTTGATGTGGATGAAGAGAGAACAGATGTTGAAGTCACATCTTCAAGTACCGATTAGAGGCTACAACAACTCATGGGAAGAAAGGGCTTTTGCAGAAGATGCAGCTAGGATACTTGGTGGGTGCATATGGCCTCCAAGATCTTACTCTTGCAGTTTCTGTAAGAGGGAATTCAGGTCTGCTCAAGCTCTAGGAGGCCACATGAATGTCCACAGAAGGGATAGAGCTAGGCTCAAGCAAAGCCTTAGCCCCCATAATGATGCCTTTCATCATCACAAGAGTGCTCAATTTTCAGTAGAGATCTGCTCCCAGCAGGATTCTTGTCTTGATCCTAATTCTGCTTCTGCTGGTAGCATCACAACTAGTAGTCTTTCAGCTTTAGCCTCACGAGAAAAAAGTGGTCAGCAAATTGTTTCTCCCCATTCTTCCATCATCAGCTGGGGACAGCAGAAGGGACCTCCTTGTACTTCATCTTTAAAGTCAGATTCTTTTGGAGGAAAACTCATGTGCACACCCGATTCAGAAATAGAAGAGACAATCATTGCGAGGGAAGAAGATGTTAAAGGCTTGGCTTGGAATAATGATGTTGAAACAAATCTATCCGTGGGATTGAGTTCTCTGTTTGGCCAAAAATTTCCAAGTGGATCATGTGGGGATGAAGCAATGATTAGTTATAAAAGAGCCAAGACTGCTGTTTCTCCACTGCCTGTCTTCCTCAAGCCATATACAAATGATATATGCCTAGCTTTGCAATCTGAAGAATTTGTACGTGGACTTCAGCCTGGTATGGAAGACTTGGATCTTGAACTCAGGCTAGGGAAAACACACAAAGTTAAGTAG 855 0.4339 MEESQYLMWMKREQMLKSHLQVPIRGYNNSWEERAFAEDAARILGGCIWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKQSLSPHNDAFHHHKSAQFSVEICSQQDSCLDPNSASAGSITTSSLSALASREKSGQQIVSPHSSIISWGQQKGPPCTSSLKSDSFGGKLMCTPDSEIEETIIAREEDVKGLAWNNDVETNLSVGLSSLFGQKFPSGSCGDEAMISYKRAKTAVSPLPVFLKPYTNDICLALQSEEFVRGLQPGMEDLDLELRLGKTHKVK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01140 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Bach3g01140 284 Pfam C2H2-type zinc finger 54 78 - -
Bach3g01140 284 Gene3D Classic Zinc Finger 51 112 - -
Bach3g01140 284 SMART c2h2final6 54 76 IPR013087 -
Bach3g01140 284 SUPERFAMILY beta-beta-alpha zinc fingers 51 81 IPR036236 -
Bach3g01140 284 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Bach3g01140 284 PANTHER OS07G0101800 PROTEIN 27 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01140 Bach-Chr3 21627231 21628085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01140 1 278 C2H2 Transcription Factor Family AT5G06070 36.014 2.95e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach3g01140 zf-C2H2_6 1.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01140 - - aprc:113851273 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00807 14 7310892 7311770 Bach3g01140 3 21627231 21628085 ECH
Bach3g01140 3 21627231 21628085 Bach3g01140 3 21627231 21628085 ECH