Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01125 AGCCATCTAGCTTTGGAATCACACTGTGCAGTTTGCAAAGAAGCTTTTGAGTTAGGCAGTGCAGCTCGGGAAATGCCTTGTAAGCATATTTACCACCCAGAATGTATTCTACCATGGCTTGCTCTTCGCAATTCCTGCCCGGTTTGCCGCCATGAATTGCCGGCTGACGCGCAGAGTGCGCCGGCAACAGGGCAATCCCTTGCTTGGAACGATGAAGAAAATGTGGGATTGACAATTTGGAGGCTCCCGGGTGGAGGGTTTGCAGTGGGAAGGTTTGCTGGTGGAAGAAGGGGTGCTGAGAGGGAGCTACCCGCAGTTTACACCGAAATGGACGGTGGGTTTAACAATGGTGGTGCGCCAAGGAGAATTTCGTGGTCATCTAGTGGGAATAGAGGGAGGCAGAGTGGTGGATTGCGTAGAATGTTTCAGAATTTGTTGGGCTGCTTCAGAGGCGGAGTTCGACCTCAGCCTTCTACTTCTAGTGCAGAAGCTAGACCTGTAAGGAGGAGTTCATCTCGTAATTCCACTAGAAATTCCTCTTCACGTGCAAGCAGGACTTGGTCTATGGATGTAAACAGTGGAACGAGGGTTTGGTAAATGCCTTGTAAGCATATTTACCACCCAGAATGTATTCTACCATGGCTTGCTCTTCGCAATTCCTGCCCGGTTTGCCGCCATGAATTGCCGGCTGACGCGCAGAGTGCGCCGGCAACAGGGCAATCCCTTGCTTGGAACGATGAAGAAAATGTGGGATTGACAATTTGGAGGCTCCCGGGTGGAGGGTTTGCAGTGGGAAGGTTTGCTGGTGGAAGAAGGGGTGCTGAGAGGGAGCTACCCGCAGTTTACACCGAAATGGACGGTGGGTTTAACAATGGTGGTGCGCCAAGGAGAATTTCGTGGTCATCTAGTGGGAATAGAGGGAGGCAGAGTGGTGGATTGCGTAGAATGTTTCAGAATTTGTTGGGCTGCTTCAGAGGCGGAGTTCGACCTCAGCCTTCTACTTCTAGTGCAGAAGCTAGACCTGTAAGGAGGAGTTCATCTCGTAATTCCACTAGAAATTCCTCTTCACGTGCAAGCAGGACTTGGTCTATGGATGTAAACAGTGGAACGAGGGTTTGGTAACTTTGGGGGAAGGCCTAGAATTGAATTGAGAATTGAGAATGCAATACGATGAGTCTTGAGGCTGTAAAAAATTATCTGGTTTCCCTAACTGGGGCCTTGGAACGGTCTGTTAAGAGTCATATATATGTTGGGTCAGTGTGCATAATGAGATTGAAT 1278 0.4953 MSAGPSSYWCYRCSRFVRVRQDLLVCPDCDSGFVEEIEHPARSVHVDARRRRFPAAAMYMIGHRPNSDQNSRPALLRTRRNGGDRSPFNPVIVLRGSSDGADHEGGDGRGFELYYDDGAGSGLRPLPPSMSEFLLGSGFERLLEQLSQIEINSIGRYEHPPASKAAIESLPTIETDDSHLALESHCAVCKEAFELGSAAREMPCKHIYHPECILPWLALRNSCPVCRHELPADAQSAPATGQSLAWNDEENVGLTIWRLPGGGFAVGRFAGGRRGAERELPAVYTEMDGGFNNGGAPRRISWSSSGNRGRQSGGLRRMFQNLLGCFRGGVRPQPSTSSAEARPVRRSSSRNSTRNSSSRASRTWSMDVNSGTRVW 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01125 375 Pfam zinc-ribbon 7 37 IPR039525 GO:0061630
Bach3g01125 375 SUPERFAMILY RING/U-box 166 233 - -
Bach3g01125 375 SMART ring_2 186 226 IPR001841 -
Bach3g01125 375 Pfam Ring finger domain 185 227 IPR001841 -
Bach3g01125 375 Pfam Protein of unknown function (DUF1117) 252 357 IPR010543 -
Bach3g01125 375 CDD RING-H2_RNF126-like 186 227 - -
Bach3g01125 375 MobiDBLite consensus disorder prediction 326 375 - -
Bach3g01125 375 MobiDBLite consensus disorder prediction 79 105 - -
Bach3g01125 375 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 86 231 - -
Bach3g01125 375 MobiDBLite consensus disorder prediction 331 375 - -
Bach3g01125 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 233 IPR013083 -
Bach3g01125 375 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
Bach3g01125 375 FunFam E3 ubiquitin-protein ligase RING1-like 148 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01125 Bach-Chr3 21536504 21537787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01125 125 235 C3H Transcription Factor Family AT5G01980 40.541 9.79e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01125 K11982 - qsa:O6P43_014338 564.688