Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01118 ATGCGGAGATACAGTCCACCATACTACAGTCCTCCTAGGAGGGGATATGGGCGTGGAGGGAGAAGCCCTCCTAGAAGGGGATACAGTGGAGGTAGACGCAGGGAACAAAATCATGGAAGCCTTTTGGTTCGAAACATTCCTCTTGATTGCAGACCTGATGAACTTCGAATTCCATTTGAGCGATTTGGTGCTGTCCGAGATGTCTATATACCAAAGGACTTTTACTCAAAGCAACCTCGAGGTTTTGCATTTGTGCAATTTGTAGATCCCTATGAGGCCTCAGAAGCGCAGTACCAGATGAATGGAAAGATTTTTGCTGGAAGGGAAATATCTGTTGTTGTTGCTGCAGAATCAAGAAAAAGACCAGAGGAGATGCGTCAAAAGACAAGGGTTAGAGGAATTGGGGGCTATGGGGGCCGGAGGTCATCTTACTATGGACGTTCACGATCTCGTTCAGTTTCTAGATCACGCTCCCCACATTATCGAACTGGTTCTAGAAGTCGATATCGCTCAAGGTCCTTTTCACCTGCCCCAAGATGGCAAAATGAATACTCTGTTTCGCCTAGGAGGGAAGCAGAGCGCCCTAGATCACCAAGAGGTCCCCCTGGTGAGCGAGGTGATCAAAACCACAGGTCATACTCTCCAGCTTATGGCAATGTCAGTGATTACAATCAAAGCAATGGATACGGGGAGAAATCCATACACGAGTTTGAGGCTGTGCGAGGCCAGTGGAGGTCATCTCCTCGTAGAGCATCAAGGTCACCTGTTGGGTCTAGATCAAGGTCTGCTGATTTGTCACCCAGACACGGGAGATGA 816 0.4841 MRRYSPPYYSPPRRGYGRGGRSPPRRGYSGGRRREQNHGSLLVRNIPLDCRPDELRIPFERFGAVRDVYIPKDFYSKQPRGFAFVQFVDPYEASEAQYQMNGKIFAGREISVVVAAESRKRPEEMRQKTRVRGIGGYGGRRSSYYGRSRSRSVSRSRSPHYRTGSRSRYRSRSFSPAPRWQNEYSVSPRREAERPRSPRGPPGERGDQNHRSYSPAYGNVSDYNQSNGYGEKSIHEFEAVRGQWRSSPRRASRSPVGSRSRSADLSPRHGR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01118 271 FunFam Serine/arginine-rich SC35-like splicing factor SCL30 isoform A 32 173 - -
Bach3g01118 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Bach3g01118 271 Gene3D - 31 157 IPR012677 -
Bach3g01118 271 MobiDBLite consensus disorder prediction 153 167 - -
Bach3g01118 271 MobiDBLite consensus disorder prediction 1 39 - -
Bach3g01118 271 MobiDBLite consensus disorder prediction 117 271 - -
Bach3g01118 271 MobiDBLite consensus disorder prediction 186 206 - -
Bach3g01118 271 MobiDBLite consensus disorder prediction 168 182 - -
Bach3g01118 271 MobiDBLite consensus disorder prediction 212 231 - -
Bach3g01118 271 SMART rrm1_1 40 113 IPR000504 GO:0003723
Bach3g01118 271 SUPERFAMILY RNA-binding domain, RBD 36 146 IPR035979 GO:0003676
Bach3g01118 271 MobiDBLite consensus disorder prediction 247 261 - -
Bach3g01118 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 110 IPR000504 GO:0003723
Bach3g01118 271 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 39 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01118 Bach-Chr3 21439065 21441941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01118 43 128 Eukaryotic Initiation Factors Gene Family AT1G71770 36.782 2.34e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01118 K12900 - gmx:100804294 301.982