Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01111 TATAACCGTTGTTTAATTCCTCTCCCAAACCTCTTATTTCTCAGCCTCCTAAACTGATTTTTTCTTCTCTCTCTCCCCATACACCCACTTTCTCTCTCATTTTCCCCTTCTAAATGGACTGCTCTTCTTCTTCTTCCTCGGAGGGTCTTAATAGTCCCGACGCAAATTTTGAAGCTGATACTGCTGGCACGCCCATCGCCGTCCGTCGAGCTCTCCAGCTCATCCAATCCGACGACCCAGATTTGAAGCTCCAAGCCGCTAGGGATATCCGGGGCCTCACCAAGACCTCTAACCGCTGTCGGCGCCAGCTCTCTGAAGCTGTCGGTCCACTCGTTTCCATGCTCCGGGTCGACTCGCCCGAGTCACATGAACCCGCTCTTCTCGCGTTGCTTAACCTCGCCGTCAAAGATGAAAAGAATAAAATCAACATTGTGGAAGCAGGTGCCTTGGAGCCGGTTATTAGTTTCCTCAAGTCAGAGAATGTAAATCTGCAGGAGTATGCAACTGCATCTTTGCTCACTTTATCTGCTTCTATAACCAACAAGCCAATTATTATTGCTGCTGGTGCTATTCCTGTTCTTGTCGATATCCTTAAGGATGGAAGCCCACAAGCTAAAGCAGATGCAGTAATGGCTCTTTCCAATTTGTTGACACATTTGAATAATCTCAACATCATTATTGAAACAAATCCGATCCCTTTTTTAGTTGATATGCTTAAAACCTGTAAAAAATCGTCAAGAACAGCTGAGAAATGCTGTGCTTTGATAGAATCCTTGGTGGGTTTTGATGAGGGGAGAACTGCCTTGACATCTGAAGAAGGTGGAGTTCTTGCGGTTGTGGAAATTCTTGAAAACGGCACTCTCCAAAGCAGGGAGCATGCTGTTGGAGCACTGCTGACTATGTGCGAAAGTGACCGTTGTAAATACAGGGAACCAATTCTTAGAGAAGGTGTCATTCCAGGACTTCTTGAGCTTACCGTTCAAGGAACGCCCAAGTCTCAGTTGAAAGCACGCACCCTATTGCAATTGCTGAGAGAATCTCCATATCCAAGATCTGAAATTCAACCTGACACTCTTGAGAATATAGTATGCAACATCATATCCCAGATAGATGGGGATGAACAATCTGGTAAAGCAAAGAAGATGCTAGCTGAGATGGTTCAAGTTAGCATGGAACAAAGTTTGAGACATTTACAGCAAAGGGCTCTCGTATGCACTCCAAGTGATTTGCCTATTGCTAGCTGTGCTTCTGAAGTTCCTTAA 1262 0.4517 MDCSSSSSSEGLNSPDANFEADTAGTPIAVRRALQLIQSDDPDLKLQAARDIRGLTKTSNRCRRQLSEAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPVISFLKSENVNLQEYATASLLTLSASITNKPIIIAAGAIPVLVDILKDGSPQAKADAVMALSNLLTHLNNLNIIIETNPIPFLVDMLKTCKKSSRTAEKCCALIESLVGFDEGRTALTSEEGGVLAVVEILENGTLQSREHAVGALLTMCESDRCKYREPILREGVIPGLLELTVQGTPKSQLKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIASCASEVP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01111 382 PANTHER U BOX DOMAIN-CONTAINING 29 313 - -
Bach3g01111 382 FunFam U-box domain-containing protein 4 16 366 - -
Bach3g01111 382 MobiDBLite consensus disorder prediction 1 20 - -
Bach3g01111 382 SUPERFAMILY ARM repeat 32 336 IPR016024 -
Bach3g01111 382 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 110 152 IPR000225 GO:0005515
Bach3g01111 382 Gene3D - 223 365 IPR011989 -
Bach3g01111 382 SMART arm_5 58 97 IPR000225 GO:0005515
Bach3g01111 382 SMART arm_5 224 265 IPR000225 GO:0005515
Bach3g01111 382 SMART arm_5 181 223 IPR000225 GO:0005515
Bach3g01111 382 SMART arm_5 99 139 IPR000225 GO:0005515
Bach3g01111 382 SMART arm_5 140 180 IPR000225 GO:0005515
Bach3g01111 382 Gene3D - 28 222 IPR011989 -
Bach3g01111 382 Pfam Armadillo/beta-catenin-like repeat 100 138 IPR000225 GO:0005515
Bach3g01111 382 Pfam Armadillo/beta-catenin-like repeat 143 179 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01111 Bach-Chr3 21379897 21382848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01111 30 307 U-box Gene Family AT2G23140 33.929 1.28e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01111 - - gmx:100780954 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01111 3 21379897 21382848 Bach3g01111 3 21379897 21382848 ECH