Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01110 ATGGCACTGGCCAAAGACAGAATTCCCCGTGACTTGAGCAGCAAGGTTCAAGCTTGTTCCTTCAATGAGGCTGCTCTTGGGGTCAATGAGTACCAGAAATCCGTGCTTGAAGATGAGGAAGGGTCACAAGGCACTAATGGGTTCAGCACCGATTCAGCCTTAACCCATTCTCCTTCTCTATGTGGCAGTGGCAGTGGATGTGCTTATAGGGCAGAAGAAGCAGAGTCTTTGATTAATTTCAAAACCAGTGGGTGTTACAACAATCTCATGCATGCTAATGAATCTTTGATGAGCTTTCAGCAGAGCAGAGAGAAAGGGTACTCTATATGGGAGAATAACTTGCTTCATGGTTATAATCAGTGGAATCAGGCTAGTCCTAAAAGCACCATGGAACCTCGCTTGATGCAAGACTTCAATTGCCTTCAAATGGCGAGTGGCTATAGCACCATGGCCAATGGTGGAAAGGATAAGCACCATGGTGAAAGTTCATATGGGTGGCTGCACTCTGAGTTAAATGTTCCTGCTGATAGCCTGAGGGACTCAGGAGAAGAAGAGGCAGTCCTCAATAAGCGTTCTTCTCAGGGAGAGAGCATGCAAGCTGCAAAAAAGCAATGCAATAGTACTACTGCAACCAAAAAGCCAAAACCTAAGTCAAATCCATCAAAGGACCCACAAAGTATAGCAGCCAAGAACAGAAGAGAAAGGATAAGCGATCGGCTTAAGATACTGCAAGAACTGGTACCTAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCCATTAGCTATGTAAAGTTTCTTCAGTTGCAAGTGAAGGTGTTGGCAACTGATGAGTTCTGGCCAGTCCAAGGTGGAAAGGCTCCTGATATATCTCAAGTCAAAGAAGCCATTGATGCCATTCTTTCCTCCCAGAAAAACAGAAATTCAAGCTCAAAATAA 945 0.4466 MALAKDRIPRDLSSKVQACSFNEAALGVNEYQKSVLEDEEGSQGTNGFSTDSALTHSPSLCGSGSGCAYRAEEAESLINFKTSGCYNNLMHANESLMSFQQSREKGYSIWENNLLHGYNQWNQASPKSTMEPRLMQDFNCLQMASGYSTMANGGKDKHHGESSYGWLHSELNVPADSLRDSGEEEAVLNKRSSQGESMQAAKKQCNSTTATKKPKPKSNPSKDPQSIAAKNRRERISDRLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKEAIDAILSSQKNRNSSSK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01110 314 SMART finulus 226 275 IPR011598 GO:0046983
Bach3g01110 314 Gene3D - 215 277 IPR036638 GO:0046983
Bach3g01110 314 CDD bHLH_AtIND_like 221 283 - -
Bach3g01110 314 Pfam Helix-loop-helix DNA-binding domain 227 270 IPR011598 GO:0046983
Bach3g01110 314 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 82 304 - -
Bach3g01110 314 MobiDBLite consensus disorder prediction 191 226 - -
Bach3g01110 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 269 IPR011598 GO:0046983
Bach3g01110 314 MobiDBLite consensus disorder prediction 178 233 - -
Bach3g01110 314 FunFam Transcription factor bHLH83 218 277 - -
Bach3g01110 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 218 279 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01110 Bach-Chr3 21369423 21370834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01110 112 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 56.436 5.20e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach3g01110 HLH 5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01110 - - gmx:100810010 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01110 3 21369423 21370834 Bach3g01110 3 21369423 21370834 ECH