Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01093 ATGTCGATTCGCAGACCCAGGCGTTTTCCGTGGCAGCGTGACTTGTTTGAAGATGGCTTAAGAGCTGCAGGGATACAAGGAGTAGAATTTGGCACAAAGTTGTATGTTTCCAACTTGGACCATGGAGTGACTAATGAAGACATTAGGGAACTTTTCTTTGAGATTGGAGACTTGAAGCGGTATGCAGTTCATTACGACAAGAATGGACATCCAAGTGGTTCAGCTGAAGTCGTCTACACCAGAAGGAGTGATGCATTTGCAGCTCTTAAACGATACAATGATGTACTTCTGGATGGAAGGCCCATGAAGATTGAGATTGTTGGTGCCAATGCAGATTTGCCTTTAACTGCTCGTGTGAATGTTACTGGGGTAAATGGGCGGAGGAAGAGGACAGTTGTAATGACGCCTGGAGGAGGTCGAGGTCGAGGGCCTCCTATGGTCAATCGTGGCACTGGTCGGGGACGCCGTGGTGGTGCAAGGGGTGGTGGTATTGGGAGTGGTCGGGGCCGTGGCCGTGGCCGTGTAACCCAAGCCAGGGGTCGAGGCCGGGGTCGTGGGAGGAAGGGACCTCTTGACAGGGAAGAACTTGACAAGGACCTCGATACCTATCACTCTGAGGCCATGAATACCTCATGA 636 0.5142 MSIRRPRRFPWQRDLFEDGLRAAGIQGVEFGTKLYVSNLDHGVTNEDIRELFFEIGDLKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNDVLLDGRPMKIEIVGANADLPLTARVNVTGVNGRRKRTVVMTPGGGRGRGPPMVNRGTGRGRRGGARGGGIGSGRGRGRGRVTQARGRGRGRGRKGPLDREELDKDLDTYHSEAMNTS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01093 211 SMART rrm1_1 33 105 IPR000504 GO:0003723
Bach3g01093 211 SUPERFAMILY RNA-binding domain, RBD 28 107 IPR035979 GO:0003676
Bach3g01093 211 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 4 208 - -
Bach3g01093 211 SMART FoP_duplication_2 138 211 IPR025715 -
Bach3g01093 211 CDD RRM_THOC4 32 106 - -
Bach3g01093 211 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 102 IPR000504 GO:0003723
Bach3g01093 211 Gene3D - 28 108 IPR012677 -
Bach3g01093 211 MobiDBLite consensus disorder prediction 185 204 - -
Bach3g01093 211 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
Bach3g01093 211 MobiDBLite consensus disorder prediction 131 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01093 Bach-Chr3 21259489 21261323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01093 31 106 Eukaryotic Initiation Factors Gene Family AT2G23350 36.842 3.31e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01093 K12881 - gmx:100801491 272.322