Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01078 ATGGTTGGGAAGAAGAGGGTAAAGCTGGTGGAGAAGGACGAGGAGAAAAGAGATAAGGAGAAGGAAACGGCATCGTCCTCATCGTCATCGACATCGTCGTCACAAACGTCGTCGTCGGATGAGCGAGAGTATGAGTTGCAGGATTTGAGGGACCGGCTAAAATCGTCGCGAGGAAGCCGGTTTGACTTGATAGAGAACGAGTTGGGACTCAACTCGACTCGGAGGAAGTTCAGTCGCCAAGCTGTCCTCAACGGCATCAGATTCTTCTCCGATGACTGCGTCATTCATCCCGATAACAGGTGGTATCGGGCATGGACAAAATTCATATTGTTGTGGGCAGTGTATTCATCCTTCTTCACTCCATTGGAGTTTGGATTTTTTCGTGGGCTGCCGGAGAATCTCTTTATACTAGACATCATTGGACAAGTAGCTTTTCTTGTAGACATTACTTTGCAGTTCTTTCTTGCTTATAGAGACAGTCAGACTTATCGTATGGTCTATAAGCGTACCCCTATAGCTCTGCGTTATTTGAAATCTAGCTTTATCTTTGATCTTCTCGGATGTTTGCCTTGGGACGTCATTTACAAGGCTTGTGGAAGAAGAGAGGAAGTGAGATACCTTTTGTGGATCAGATTATATCGGGTGCGCAAAGTCGATGATTTTTTCCAGAGGTTGGAGAAAGATATACGTATTAATTACATGTTTACAAGGATTTTGAAACTTTTGGTCGTTGAACTGTATTGCACCCACACGGCAGCCTGCATCTTCTACTATCTGGCTACAACACTGCCACCTTCCCAAGAAGGATACACTTGGATTGGAAGTTTAAAGTTGGGTGACTATAGTTACTCACATTTCAGAGAAATTGATCTGTGGAAGCGCTACACAACATCTCTGTATTTTGCTATTGTTACCATGGCTACTGTTGGTTATGGAGATATACATGCTGTCAATATGAGGGAGATGATATTCATAATGATATACGCTTCTTTTGACATGGTTCTTGGTGCCTATTTGATTGGTAACATGACAGCATTGATTGTCAAAGGATCAAAGACTGAAAAGTTTAGGGACAAAATGACAGATCTCTTGAAATATATGAATAGAAACAGGCTTGGACAGGACATCCGTGAACAAATAAAAGGCCATTTTCGTTTACAGTATGAGAGTAGCTACACTGAGGCTGCTGTCATTCAGGACATTCCCATTTCTATCCGCTCTAAGATAGCGCAAACGTTATATTTGCCATACATTGAAAATGTTTCTGTCTTTAAGGGGTGTAGTTCAGAATTCATCAATCAGATTGTTATTCGGCTTCACGAAGAATTTTTTCTACCAGGGGAAGTGATAATGGAACTAGGAAATGCTGTAGATCAACTATACTTTGTCTGTCATGGTGTTCTGGAGGAGGTAGGCATAGGTGAAGATGGATCAGAAGAGACTCTTTCACTACTAAAGCGCAACAGTTCATTTGGAGAAGTTTCTATTCTTTGTAACATTCCTCAGCCATATACTGTTCGGGTTTGTGAACTGTGTAGGCTTCTGCGGCTTGACAAACAATCACTTACGAACATCCTTGACATATACTTTTATGACGGGAGGAAAATGTTAAACAATCTTCTAGAGGGAAAAGAATCTTTTCGAGGTAAGCAATTGGAGTCAGACATCACATTTCATATCGGAAAGCAAGAAGCTGAGCTCGCTTTAAAGGTCAATAATGCAGCCTTTCATGGGGATCTGTTTCAGCTAAAAAGTTTGATTCGAGCTGGAGCTGATCCCAACAAGACCGATTATGATGGAAGGTCACCCTTGCATCTTTCTGCATCTAGAGGAGATGAAATTATCACTCTTTTCCTCATTCAGGAAGGTGTAAACGTCAATATTAGAGATAACTTTGGGAACACACCTTTACTTGAAGCTGTTAAGAACGGACATGATCGAGTTGCTTCCTTACTTGTTAAAGAAGGGGCCTCAATGAAAATAGACAATGCTGGTAGTTTCCTATGTACAGCTGTTGCTAGGGGCGATTCAGATTATCTTCAAAGGCTTTTATCTAATGGCATGGATCCCAACTCAAAAGATTATGATTACCGAAGCCCTCTTCATGTTGCTGCTGCTGAAGGTTTATTATTCATGGCAAAGTTGCTATTAGCAGCTGGAGCTAGTGTTTTCACCAAAGATAGATGGGGAAATACTCCACTTGATGAAGCTCGGATGTCTGGAAACAGGAATCTTATCAGGTTACTCGAAGATGCAAAGTCTGCTCAGTTGTCAGAATTCCCATATCCCTCCGCAGATATTACAGATAAAATGCACCCAAAGAAATGCACAGTGTTCCCTTTCCACCCATGGGATTCAAAAGAACATAGAAGGCATGGAATTGTACTATGGGTTCCACACACCATTGAAGATCTCATCAAAACAGCAGCAGAGCAGCTAGAGCTTTCTAGAGGTTGTTGTATTTTATCTGAGGATGGTGGTAAAATTATTGATGTGGACATGATTAAGGATGGTCAAAAGCTATATTTAATCCATGAAACACATTAG 2547 0.4138 MVGKKRVKLVEKDEEKRDKEKETASSSSSSTSSSQTSSSDEREYELQDLRDRLKSSRGSRFDLIENELGLNSTRRKFSRQAVLNGIRFFSDDCVIHPDNRWYRAWTKFILLWAVYSSFFTPLEFGFFRGLPENLFILDIIGQVAFLVDITLQFFLAYRDSQTYRMVYKRTPIALRYLKSSFIFDLLGCLPWDVIYKACGRREEVRYLLWIRLYRVRKVDDFFQRLEKDIRINYMFTRILKLLVVELYCTHTAACIFYYLATTLPPSQEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYASFDMVLGAYLIGNMTALIVKGSKTEKFRDKMTDLLKYMNRNRLGQDIREQIKGHFRLQYESSYTEAAVIQDIPISIRSKIAQTLYLPYIENVSVFKGCSSEFINQIVIRLHEEFFLPGEVIMELGNAVDQLYFVCHGVLEEVGIGEDGSEETLSLLKRNSSFGEVSILCNIPQPYTVRVCELCRLLRLDKQSLTNILDIYFYDGRKMLNNLLEGKESFRGKQLESDITFHIGKQEAELALKVNNAAFHGDLFQLKSLIRAGADPNKTDYDGRSPLHLSASRGDEIITLFLIQEGVNVNIRDNFGNTPLLEAVKNGHDRVASLLVKEGASMKIDNAGSFLCTAVARGDSDYLQRLLSNGMDPNSKDYDYRSPLHVAAAEGLLFMAKLLLAAGASVFTKDRWGNTPLDEARMSGNRNLIRLLEDAKSAQLSEFPYPSADITDKMHPKKCTVFPFHPWDSKEHRRHGIVLWVPHTIEDLIKTAAEQLELSRGCCILSEDGGKIIDVDMIKDGQKLYLIHETH 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01078 848 Pfam Ankyrin repeats (3 copies) 574 661 IPR002110 GO:0005515
Bach3g01078 848 Pfam Ankyrin repeats (3 copies) 669 750 IPR002110 GO:0005515
Bach3g01078 848 FunFam Gated outwardly-rectifying K+ channel 638 764 - -
Bach3g01078 848 Gene3D - 665 759 IPR036770 -
Bach3g01078 848 CDD CAP_ED 423 537 IPR000595 -
Bach3g01078 848 MobiDBLite consensus disorder prediction 1 44 - -
Bach3g01078 848 ProSiteProfiles cAMP/cGMP binding motif profile. 423 543 IPR000595 -
Bach3g01078 848 MobiDBLite consensus disorder prediction 1 24 - -
Bach3g01078 848 ProSiteProfiles Ankyrin repeat profile. 696 728 IPR002110 GO:0005515
Bach3g01078 848 FunFam Potassium channel KAT2 411 548 - -
Bach3g01078 848 FunFam Potassium channel SKOR 103 348 - -
Bach3g01078 848 ProSiteProfiles Ankyrin repeat profile. 632 664 IPR002110 GO:0005515
Bach3g01078 848 PANTHER POTASSIUM CHANNEL AKT1 67 844 IPR045319 GO:0005249|GO:0006813
Bach3g01078 848 Pfam Ion transport protein 103 348 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach3g01078 848 Gene3D Helix hairpin bin 350 406 - -
Bach3g01078 848 Gene3D Jelly Rolls 407 545 IPR014710 -
Bach3g01078 848 PRINTS EAG/ELK/ERG potassium channel family signature 339 348 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach3g01078 848 PRINTS EAG/ELK/ERG potassium channel family signature 295 312 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach3g01078 848 PRINTS EAG/ELK/ERG potassium channel family signature 138 148 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach3g01078 848 PRINTS EAG/ELK/ERG potassium channel family signature 247 257 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach3g01078 848 SMART ANK_2a 696 725 IPR002110 GO:0005515
Bach3g01078 848 SMART ANK_2a 599 628 IPR002110 GO:0005515
Bach3g01078 848 SMART ANK_2a 663 692 IPR002110 GO:0005515
Bach3g01078 848 SMART ANK_2a 632 661 IPR002110 GO:0005515
Bach3g01078 848 SMART ANK_2a 729 759 IPR002110 GO:0005515
Bach3g01078 848 Pfam KHA, dimerisation domain of potassium ion channel 774 843 IPR021789 -
Bach3g01078 848 ProSiteProfiles Ankyrin repeat region circular profile. 632 663 - -
Bach3g01078 848 Gene3D - 105 349 - -
Bach3g01078 848 SUPERFAMILY cAMP-binding domain-like 351 541 IPR018490 -
Bach3g01078 848 ProSiteProfiles KHA domain profile. 775 848 IPR021789 -
Bach3g01078 848 MobiDBLite consensus disorder prediction 25 40 - -
Bach3g01078 848 SUPERFAMILY Voltage-gated potassium channels 96 348 - -
Bach3g01078 848 Gene3D - 556 664 IPR036770 -
Bach3g01078 848 ProSiteProfiles Ankyrin repeat profile. 599 631 IPR002110 GO:0005515
Bach3g01078 848 SUPERFAMILY Ankyrin repeat 572 751 IPR036770 -
Bach3g01078 848 ProSiteProfiles Ankyrin repeat region circular profile. 696 728 - -
Bach3g01078 848 SMART cnmp_10 423 541 IPR000595 -
Bach3g01078 848 ProSiteProfiles Ankyrin repeat region circular profile. 599 631 - -
Bach3g01078 848 Pfam Cyclic nucleotide-binding domain 443 527 IPR000595 -
Bach3g01078 848 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01078 Bach-Chr3 21153875 21160121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01078 670 749 Ion Channels AT5G37500 34.314 3.89e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01078 K21867 - gmx:100814385 1464.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01078 3 21153875 21160121 Bach3g01078 3 21153875 21160121 ECH